Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SVIPQ8NHG7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RNU6-254P-201ENST00000363377 107 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RNU6-529P-201ENST00000363383 104 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 PADI4-202ENST00000375453 841 ntTSL 2 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 MIR185-201ENST00000385288 82 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 IGHV1-46-201ENST00000390622 655 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 MIR663B-201ENST00000408361 115 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL627095.1-201ENST00000414775 321 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 Z83851.1-201ENST00000420096 545 ntTSL 4 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 OR2AM1P-201ENST00000422137 422 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL121916.1-201ENST00000429405 308 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 NFU1P2-201ENST00000448700 469 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 PMS2P11-201ENST00000451831 574 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 U8.21-201ENST00000459536 136 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RN7SL769P-201ENST00000469386 295 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AP001318.1-201ENST00000476981 321 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RN7SL535P-201ENST00000479087 296 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RPL19P13-201ENST00000483119 583 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC114801.2-201ENST00000503825 781 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC002456.2-201ENST00000509356 380 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC004980.4-201ENST00000513375 203 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 SCARNA20.1-201ENST00000516009 138 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RNA5SP408-201ENST00000516115 100 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC105031.1-201ENST00000518550 476 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 ACTBP6-201ENST00000520036 1090 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AP000916.2-201ENST00000528904 286 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL589743.2-201ENST00000547821 602 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC026371.1-201ENST00000551867 419 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC013553.1-201ENST00000560906 267 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 IGHV1OR15-3-201ENST00000564926 351 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC138761.3-201ENST00000579993 334 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC100830.2-201ENST00000581636 240 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RN7SL217P-201ENST00000584520 286 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 RPL30P11-203ENST00000598995 310 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL356218.2-201ENST00000605264 187 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 GAGE13-201ENST00000612958 530 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AL096828.3-201ENST00000615354 462 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC008121.3-201ENST00000618726 433 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC134878.2-201ENST00000620700 1265 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC233724.15-201ENST00000621430 236 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 NME4-212ENST00000621774 904 ntTSL 3 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 AC135068.9-201ENST00000628927 355 ntBASIC3.16□□□□□ -1.9
SVIPQ8NHG7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SVIPQ8NHG7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.9
SVIPQ8NHG7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
SVIPQ8NHG7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 MIR575-201ENST00000385013 94 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 AL592291.1-201ENST00000403830 352 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 AL162578.1-201ENST00000406202 378 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 OR3A2-201ENST00000408891 1076 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 RPSAP31-201ENST00000416648 895 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.15□□□□□ -1.91
SVIPQ8NHG7 RPS7P14-201ENST00000426405 583 ntBASIC3.15□□□□□ -1.91
SVIPQ8NHG7 RSL24D1P6-201ENST00000426934 401 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms