Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC025034.2-201ENST00000623264 286 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC008432.1-201ENST00000615912 1320 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 RPL7P52-201ENST00000449200 742 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MAL2-205ENST00000521048 575 ntTSL 4 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AP000889.2-201ENST00000532684 490 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC008687.2-201ENST00000597865 520 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC123786.2-201ENST00000603459 275 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AP005212.4-201ENST00000614206 710 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 AC005336.3-201ENST00000623833 2679 ntBASIC0.72□□□□□ -2.29
SYNE1Q8NF91 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
SYNE1Q8NF91 NPM1P10-201ENST00000398310 865 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.71□□□□□ -2.29
SYNE1Q8NF91 MTND4LP16-201ENST00000440828 295 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC112673.1-201ENST00000513168 575 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 SNORA9.3-201ENST00000516383 129 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AP001317.1-201ENST00000531194 960 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.71□□□□□ -2.29
SYNE1Q8NF91 MIR4635-201ENST00000583759 79 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 SNORA4-201ENST00000584302 138 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC002984.1-201ENST00000591692 448 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC012213.4-201ENST00000606457 354 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 AC006065.5-201ENST00000623427 349 ntBASIC0.71□□□□□ -2.29
SYNE1Q8NF91 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 FAT1P1-201ENST00000406588 507 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNA5SP129-201ENST00000410276 118 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC026436.1-201ENST00000510537 270 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC007621.1-201ENST00000604544 437 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 SNORA7.2-201ENST00000364446 145 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNU2-6P-201ENST00000411404 190 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC034244.2-201ENST00000514668 858 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MTND2P17-201ENST00000550281 688 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC007620.3-201ENST00000608131 497 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AL355578.1-201ENST00000607405 1328 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC244517.1-201ENST00000606030 2086 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AP000526.1-201ENST00000603308 1388 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNU6-661P-201ENST00000362409 107 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 SNORD21-201ENST00000383953 95 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MIR1250-201ENST00000408098 113 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 ELOCP6-201ENST00000429066 328 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC104308.1-201ENST00000454621 333 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 ELOCP12-201ENST00000458706 328 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC010627.1-201ENST00000503819 1294 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 OR5BN1P-201ENST00000532955 829 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 ELOCP31-201ENST00000540463 467 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC019159.1-201ENST00000605094 187 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC010200.2-201ENST00000605098 235 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC018754.1-201ENST00000607486 925 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC006023.2-201ENST00000609916 167 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AL359198.2-201ENST00000611836 194 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MIR7153-201ENST00000637758 57 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNU1-91P-201ENST00000364746 163 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RNU1-100P-201ENST00000365255 165 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 U8.8-201ENST00000365399 135 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AL590290.1-201ENST00000405336 380 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC004987.3-201ENST00000413879 771 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 OR4G11P-201ENST00000492842 939 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC093673.2-201ENST00000609674 331 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC138915.1-201ENST00000565427 1685 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 SNORD114-26-201ENST00000363543 72 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AL354719.1-201ENST00000406535 843 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 RPL21P134-201ENST00000453468 483 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC069277.2-201ENST00000454211 432 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MIR3690-201ENST00000580266 75 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 NRBF2P1-201ENST00000587407 859 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 MIR6779-201ENST00000617283 64 ntBASIC0.71□□□□□ -2.3
SYNE1Q8NF91 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE1Q8NF91 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms