Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU6-636P-201ENST00000384598 107 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 MIR183-201ENST00000384958 110 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC107081.1-201ENST00000414975 361 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 HSFY4P-201ENST00000415994 1181 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 ELOCP9-201ENST00000418624 239 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 HMGB1P49-201ENST00000418882 569 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AL049610.1-201ENST00000423374 372 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 RPL23AP82-202ENST00000427528 469 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 EEF1A1P39-201ENST00000440791 250 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC008264.1-201ENST00000447612 367 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 MTND1P31-201ENST00000449206 961 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC104986.1-201ENST00000517978 436 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC022690.1-201ENST00000526681 550 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 HSPE1P3-201ENST00000559254 309 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC009097.3-201ENST00000563557 1018 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 MTND3P13-201ENST00000574391 343 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC053481.3-201ENST00000577881 843 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC022146.1-201ENST00000595307 847 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC006254.3-201ENST00000603353 884 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 MTND3P19-201ENST00000603825 345 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC068313.1-201ENST00000604028 1008 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC008962.1-201ENST00000605729 304 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AL355493.4-201ENST00000618530 292 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC073348.1-201ENST00000623002 331 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 AC004009.2-201ENST00000623016 728 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 U6.105-201ENST00000637379 88 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RTL3Q8N8U3 PWAR6-201ENST00000552334 4618 ntBASIC3.48□□□□□ -1.85
RTL3Q8N8U3 ZNF807-201ENST00000328088 1707 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC058791.1-201ENST00000608412 3198 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 ERHP2-201ENST00000402323 299 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 RNU2-47P-201ENST00000410649 186 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 MTATP6P27-201ENST00000416987 621 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 CYCSP35-201ENST00000451978 304 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 MTCO3P11-201ENST00000455103 774 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC008155.2-201ENST00000464337 397 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 ERHP1-201ENST00000523006 310 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 MTATP6P15-201ENST00000527233 835 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC023538.1-201ENST00000534576 736 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 CR383656.7-201ENST00000548164 174 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC005476.1-201ENST00000554427 397 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC023813.2-201ENST00000564321 469 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 MIR5047-201ENST00000579212 100 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AL022099.1-201ENST00000604551 712 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC025588.2-201ENST00000604851 466 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC019176.2-201ENST00000611579 315 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC021755.4-201ENST00000616620 456 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC002076.2-201ENST00000617362 122 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AL158163.2-201ENST00000619110 700 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC019226.2-201ENST00000625973 424 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC017071.1-201ENST00000564407 2204 ntBASIC3.47□□□□□ -1.85
RTL3Q8N8U3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.46□□□□□ -1.85
RTL3Q8N8U3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AP002907.1-201ENST00000606361 1430 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AL450338.1-201ENST00000407987 512 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 RPS15AP38-201ENST00000413110 372 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC093578.1-201ENST00000415219 368 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC127526.1-201ENST00000417526 366 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AL389915.1-201ENST00000422463 466 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms