Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNA5SP479-201ENST00000364858 117 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 SNORA57.1-201ENST00000391227 145 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 SDHCP2-201ENST00000398565 501 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 RPS4XP8-201ENST00000402039 771 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 RN7SKP27-201ENST00000410684 333 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 RN7SKP263-201ENST00000411194 309 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AMD1P2-201ENST00000412936 992 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 SDCBPP3-201ENST00000419629 891 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 OR2AS1P-201ENST00000427827 319 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 CYCSP43-201ENST00000438233 310 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 FDX1P2-201ENST00000450769 375 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 SNORD97-201ENST00000459187 142 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 RPL23AP2-201ENST00000471227 466 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AC104383.1-201ENST00000530297 370 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AL109766.1-201ENST00000555080 552 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AC023575.1-201ENST00000580510 358 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 MIR548S-201ENST00000581352 82 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AL162413.1-201ENST00000603198 110 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 AL354950.2-201ENST00000617939 290 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNPOQ8N3V7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 RAD17P1-201ENST00000418130 2042 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 RNA5SP388-201ENST00000362584 119 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 Y_RNA.367-201ENST00000365544 101 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 RN7SKP285-201ENST00000410137 318 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 USP9YP6-201ENST00000413550 854 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AL356387.2-201ENST00000422272 243 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 MED13P1-201ENST00000428342 171 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 USP9YP7-201ENST00000436723 430 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 MTATP6P23-201ENST00000440153 476 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 DPPA3P1-201ENST00000448050 469 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 USP9YP32-201ENST00000452432 430 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 HMGB3P16-201ENST00000508037 287 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC117522.1-201ENST00000509821 380 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 RNU6-709P-201ENST00000517257 104 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AP000827.1-201ENST00000527814 258 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AP001781.1-201ENST00000530977 207 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC068831.4-201ENST00000556118 109 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AP002360.4-201ENST00000606980 481 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC002553.4-201ENST00000616896 331 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AL353748.2-201ENST00000622148 471 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AC110801.1-201ENST00000623590 212 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 AL731566.1-201ENST00000620490 1937 ntBASIC4.79□□□□□ -1.64
SYNPOQ8N3V7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 AC092326.2-201ENST00000624772 1561 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 AC073343.1-201ENST00000328239 651 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 Y_RNA.38-201ENST00000362617 102 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 SNORA62.1-201ENST00000364287 154 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 RNU6-74P-201ENST00000384235 107 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 HSPD1P16-201ENST00000402302 394 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 Y_RNA.604-201ENST00000410574 102 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 PPP1R11P2-201ENST00000423543 382 ntBASIC4.78□□□□□ -1.64
SYNPOQ8N3V7 RAC1P6-201ENST00000423911 575 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms