Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC023050.2-201ENST00000544968 387 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 GTF2IP22-201ENST00000554443 182 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 MIR4760-201ENST00000585040 80 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 KLKP1-201ENST00000595979 403 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC006539.2-201ENST00000601729 572 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 BDH2P1-201ENST00000602288 736 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC025588.2-201ENST00000604851 466 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AL133507.1-201ENST00000605269 557 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC103706.2-201ENST00000638080 240 ntBASIC3.75□□□□□ -1.81
PRPF39Q86UA1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PRPF39Q86UA1 AC093908.1-201ENST00000623125 8092 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RNU6-343P-201ENST00000364709 104 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AL136372.1-201ENST00000403060 228 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 SNORA11.1-201ENST00000408133 129 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RPS15AP38-201ENST00000413110 372 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC007390.1-201ENST00000415722 356 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RPS24P7-201ENST00000416921 246 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RPL22P18-201ENST00000417197 377 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC024082.2-201ENST00000434771 238 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 SSXP4-201ENST00000451349 245 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 PRSS3P4-201ENST00000453323 162 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC108860.1-201ENST00000484521 383 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RPS3AP50-201ENST00000487064 803 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC104685.1-201ENST00000502445 371 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC110768.1-201ENST00000509222 400 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AP001372.4-201ENST00000524889 472 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC090186.1-201ENST00000605991 572 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC107952.2-201ENST00000606048 486 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 RNU6-88P-201ENST00000606801 100 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AP002826.1-201ENST00000608835 315 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AL110115.1-201ENST00000614396 364 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC011330.2-201ENST00000621680 635 ntBASIC3.74□□□□□ -1.81
PRPF39Q86UA1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.74□□□□□ -1.81
PRPF39Q86UA1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MIR208A-201ENST00000362287 71 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 RNA5SP387-201ENST00000364226 106 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 RNA5SP51-201ENST00000364750 119 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MIR184-201ENST00000384962 84 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MIR218-2-201ENST00000385006 110 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 RPS3AP25-201ENST00000411660 793 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 HMGB3P20-201ENST00000417997 600 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 MTND1P32-201ENST00000433043 938 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 NEK4P1-201ENST00000433383 879 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AL591719.1-201ENST00000444669 744 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AL592447.1-201ENST00000447592 540 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AC010655.1-201ENST00000449336 292 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AC026801.2-201ENST00000515352 425 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 RNU6-528P-201ENST00000516926 100 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AL354943.1-201ENST00000572103 781 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AC010591.1-201ENST00000603941 649 ntBASIC3.73□□□□□ -1.81
PRPF39Q86UA1 AL592295.2-201ENST00000612578 206 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms