Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNA5SP73-201ENST00000516744 108 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 BRD9P1-201ENST00000529855 560 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 SUB1P2-201ENST00000556401 297 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 MIR3146-201ENST00000580367 79 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AL139395.1-201ENST00000603662 160 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC008277.2-201ENST00000605196 797 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 MIR7155-201ENST00000615925 56 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 RMST_9.1-201ENST00000619945 193 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AC139792.3-201ENST00000623525 224 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 AL159972.1-201ENST00000625150 448 ntBASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCHD4Q6ZW05 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 CPHL1P-201ENST00000461341 3407 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 SDAD1P1-202ENST00000524156 2051 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 RNU6-1085P-201ENST00000363576 107 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC005517.2-201ENST00000424673 553 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 LYPLA1P1-201ENST00000434514 622 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 HMGB1P31-201ENST00000437242 427 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 FTH1P1-201ENST00000437933 532 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 SNORD121B-201ENST00000458838 81 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC069439.1-201ENST00000494739 167 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AL139099.1-201ENST00000497398 403 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC023141.12-201ENST00000512399 199 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AP000676.2-201ENST00000529711 301 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC118273.2-201ENST00000532092 465 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AP004242.1-201ENST00000533701 349 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AL512360.1-201ENST00000555346 234 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC091042.1-201ENST00000579213 173 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC068790.5-201ENST00000602741 355 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC012507.3-201ENST00000603556 477 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC007363.1-201ENST00000604736 620 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC004067.1-201ENST00000608733 700 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC017083.3-201ENST00000609955 700 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC006338.1-201ENST00000618453 749 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 MIR6719-201ENST00000622428 87 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
PTCHD4Q6ZW05 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
PTCHD4Q6ZW05 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 Y_RNA.159-201ENST00000363674 87 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 MIR659-201ENST00000384963 97 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 SDHCP2-201ENST00000398565 501 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 MIR1911-201ENST00000410783 80 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 RPS20P14-201ENST00000412545 360 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 HMGB3P20-201ENST00000417997 600 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 USP9YP27-201ENST00000418455 438 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 MTCO1P20-201ENST00000425366 358 ntBASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCHD4Q6ZW05 RPL23AP93-201ENST00000440847 484 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms