Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC123904.3-201ENST00000547218 814 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 EIF5A2P1-201ENST00000564027 460 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC079148.1-201ENST00000565944 819 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC017100.2-201ENST00000584628 355 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC012254.4-201ENST00000588843 273 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC093732.2-201ENST00000607950 274 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 MIR6076-201ENST00000617521 113 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC092650.2-201ENST00000619984 902 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AC079228.1-201ENST00000624774 1049 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 AP001002.2-201ENST00000625137 386 ntBASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMARCD3Q6STE5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 RNU1-112P-201ENST00000364401 164 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 RNU2-17P-201ENST00000410290 190 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC092638.1-201ENST00000411966 1275 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AL158825.1-201ENST00000414735 521 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AL121882.1-201ENST00000422893 417 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 LSM1P1-201ENST00000438629 273 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 RPS27P27-201ENST00000498779 255 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 SNORA31.21-201ENST00000517180 77 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 OR5AK3P-201ENST00000527486 1297 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AP003049.1-201ENST00000529418 457 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 CR383656.14-201ENST00000551951 406 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 MIR3200-201ENST00000580767 85 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC060766.3-201ENST00000591442 263 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AP001033.2-201ENST00000609701 1003 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AL161734.1-201ENST00000609720 557 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC097460.3-201ENST00000623099 442 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 AC104446.1-201ENST00000613728 1321 ntBASIC2.38□□□□□ -2.03
SMARCD3Q6STE5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 MIR6073-201ENST00000352083 89 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 ATP5F1P6-201ENST00000402768 767 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 MTCO2P1-201ENST00000424648 477 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 VN1R42P-201ENST00000424651 344 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC011816.1-201ENST00000441346 546 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC004865.1-201ENST00000442276 1003 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 NANOGNBP1-201ENST00000448444 480 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 KC877373.1-201ENST00000479066 408 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 OR10V3P-201ENST00000525712 725 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 MIR5092-201ENST00000583139 88 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 XIAPP1-201ENST00000603162 600 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AC009570.1-201ENST00000609599 745 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AL163051.2-201ENST00000618976 735 ntBASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.37□□□□□ -2.03
SMARCD3Q6STE5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 AC026241.1-201ENST00000517873 2142 ntBASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMARCD3Q6STE5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms