Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC233981.1-201ENST00000423224 461 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AL353777.1-201ENST00000425552 326 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 RPL23AP30-201ENST00000432419 501 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 CYCSP24-201ENST00000445119 316 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 PHBP16-201ENST00000446318 950 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 HMGN3P1-201ENST00000453847 193 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 PPP1R2P5-201ENST00000457256 603 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 RPS15AP1-201ENST00000457423 391 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AL049874.2-201ENST00000492636 288 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-264P-201ENST00000517134 104 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.720-201ENST00000517166 92 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 HMGB1P6-201ENST00000569046 646 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC090312.1-201ENST00000580637 348 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 MIR3118-1-201ENST00000581787 76 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 Z84480.1-201ENST00000605131 311 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AL391813.2-201ENST00000609113 322 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC084781.2-201ENST00000615568 161 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC119674.1-207ENST00000641355 633 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 RNA5SP366-201ENST00000365454 123 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 SNORA20.2-201ENST00000383922 131 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.395-201ENST00000383945 109 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-831P-201ENST00000384548 107 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AL445189.1-201ENST00000405722 338 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC078974.1-201ENST00000411597 223 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 MTCO2P27-201ENST00000420740 428 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 BEND7P1-201ENST00000422058 457 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC010881.1-201ENST00000433830 235 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 DHFRP3-201ENST00000455595 559 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 RPL31P50-201ENST00000471002 296 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 RN7SL817P-201ENST00000480777 288 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 TMEM251P1-201ENST00000503717 318 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC010587.1-201ENST00000505809 469 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 TTC39CP1-201ENST00000512513 755 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC105417.1-201ENST00000514691 285 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-559P-201ENST00000516151 98 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC105031.1-201ENST00000518550 476 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AP003730.1-201ENST00000524605 285 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AP003072.2-201ENST00000527756 676 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 MIR4716-201ENST00000579628 84 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 XIAPP1-201ENST00000603162 600 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 RNF138P2-201ENST00000603490 592 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC011468.4-201ENST00000603942 409 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AC087588.2-201ENST00000617667 426 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 MIR3653-201ENST00000625572 110 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 BTBD10P1-201ENST00000549824 1352 ntBASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CNKSR3Q6P9H4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 AC025125.1-201ENST00000624743 1922 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RNA5SP391-201ENST00000363456 119 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RN7SKP44-201ENST00000363602 316 ntBASIC4.97□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-108P-201ENST00000365558 107 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms