Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT40Q6A162 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT40Q6A162 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT40Q6A162 AC092079.1-201ENST00000558620 1985 ntBASIC4.82□□□□□ -1.64
KRT40Q6A162 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT40Q6A162 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC138915.3-201ENST00000562908 1389 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 Y_RNA.46-201ENST00000362695 102 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 RNU6-483P-201ENST00000384088 108 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 MIR649-201ENST00000384843 97 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC016769.3-201ENST00000396562 315 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 RN7SKP159-201ENST00000410657 292 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 EIF4A1P3-201ENST00000411521 244 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AMD1P2-201ENST00000412936 992 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 OR51A5P-201ENST00000415429 942 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 PIGFP2-201ENST00000421400 651 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC012498.1-201ENST00000424037 437 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 MTND6P18-201ENST00000439477 513 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AL162151.2-201ENST00000448875 158 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT40Q6A162 RAD23BP3-201ENST00000454157 1152 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC099563.1-201ENST00000456086 418 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AP000852.1-201ENST00000472460 573 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC017037.1-201ENST00000508460 471 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC046134.1-201ENST00000514454 666 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 Y_RNA.693-201ENST00000516641 110 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC008127.2-201ENST00000549925 1075 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 RN7SL703P-201ENST00000578485 302 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 MIR3682-201ENST00000581338 84 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AL035413.2-201ENST00000604801 525 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AC012468.1-201ENST00000604888 430 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AL390208.1-201ENST00000605885 644 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AP003117.2-201ENST00000606010 545 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AL445264.1-201ENST00000621719 171 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
KRT40Q6A162 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT40Q6A162 AC097504.1-201ENST00000515103 2415 ntBASIC4.81□□□□□ -1.64
KRT40Q6A162 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT40Q6A162 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC009313.2-201ENST00000417893 1941 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 CBX3P1-201ENST00000325243 554 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 RNU6-282P-201ENST00000365357 103 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 RNU6-1293P-201ENST00000384077 107 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 SNORA51.6-201ENST00000384151 125 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC093578.1-201ENST00000415219 368 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 MTND3P17-201ENST00000416968 344 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 HMGB3P9-201ENST00000441799 583 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 RPL21P89-201ENST00000444021 467 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.8□□□□□ -1.64
KRT40Q6A162 RNF138P1-201ENST00000502765 546 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 NPM1P41-201ENST00000512920 831 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 Y_RNA.672-201ENST00000516289 104 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT40Q6A162 MTND1P35-201ENST00000526739 508 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms