Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC004980.4-201ENST00000513375 203 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC006427.1-201ENST00000514359 712 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 MTND4P7-201ENST00000523876 130 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC018552.3-201ENST00000567416 561 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC022884.2-201ENST00000578535 580 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 RN7SL435P-201ENST00000584418 282 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC017100.2-201ENST00000584628 355 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 MIR6839-201ENST00000620425 113 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 AC008013.2-202ENST00000637965 364 ntBASIC5.39□□□□□ -1.55
RNF43Q68DV7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF43Q68DV7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF43Q68DV7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC005592.1-201ENST00000566527 1640 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 HSPE1P11-201ENST00000339579 310 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 Y_RNA.212-201ENST00000364177 102 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 RNU6-266P-201ENST00000364225 107 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 RNU6-450P-201ENST00000364654 107 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 ARF4P3-201ENST00000397387 509 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL356421.1-201ENST00000403255 413 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL031663.1-201ENST00000437445 219 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 HSFY6P-201ENST00000445573 403 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 TPT1P12-201ENST00000448968 492 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC002553.2-201ENST00000453217 340 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 RN7SL385P-201ENST00000468873 276 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC055855.1-201ENST00000489563 579 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 RPL23AP72-201ENST00000492447 435 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC079140.5-201ENST00000507882 310 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 RNU2-53P-201ENST00000516257 147 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 DUX4L52-201ENST00000549363 777 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 EDDM3DP-201ENST00000554692 434 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 MIR5583-1-201ENST00000580941 59 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL353997.4-201ENST00000586196 166 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AL354984.3-201ENST00000604803 325 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC141273.2-201ENST00000618989 130 ntBASIC5.38□□□□□ -1.55
RNF43Q68DV7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF43Q68DV7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF43Q68DV7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AL121950.1-201ENST00000624993 2077 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 RNU1-74P-201ENST00000384108 171 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 RNU6-1029P-201ENST00000384109 107 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 MIR105-1-201ENST00000385222 81 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 MIR1271-201ENST00000408537 86 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 RNU2-36P-201ENST00000410361 191 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 RPL23AP15-201ENST00000450202 459 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC092647.2-201ENST00000452998 253 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC009127.1-201ENST00000467090 155 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC097484.1-201ENST00000471148 389 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 RNU6-699P-201ENST00000517081 110 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms