Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNY3P13-201ENST00000365542 102 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 MIR558-201ENST00000384920 94 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 SNORD37.1-201ENST00000390968 65 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 Z98745.1-201ENST00000402553 494 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RNU4-26P-201ENST00000410270 107 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RNU6-1148P-201ENST00000410992 104 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC011933.1-201ENST00000413334 321 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 MED13P1-201ENST00000428342 171 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 EZH2P1-201ENST00000431167 291 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RPL23AP93-201ENST00000440847 484 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AL359073.1-201ENST00000448036 403 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 MTND3P16-201ENST00000452205 344 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC116533.1-201ENST00000459748 321 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC006512.1-201ENST00000468816 291 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RPL23AP11-201ENST00000475260 469 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC105137.1-201ENST00000484355 562 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RPL21P129-201ENST00000491732 478 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AP000827.1-201ENST00000527814 258 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 NCAPGP2-201ENST00000557911 754 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC034105.4-201ENST00000568304 277 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 IPO5P1-202ENST00000600039 287 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC008638.3-201ENST00000603341 463 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RNA5SP196-201ENST00000625967 102 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 AC134503.1-201ENST00000633048 54 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 THAP12P5-201ENST00000405864 2275 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 IQCB2P-201ENST00000401788 1633 ntBASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.84□□□□□ -1.47
USPL1Q5W0Q7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USPL1Q5W0Q7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 ASNSP3-201ENST00000451989 1306 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 Y_RNA.138-201ENST00000363462 102 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC009302.1-201ENST00000417147 390 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 ARL5AP1-201ENST00000418991 388 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 OR4K11P-201ENST00000431829 904 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 SNORD19B-201ENST00000459623 84 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 RN7SKP116-201ENST00000516902 319 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 OR4K8P-201ENST00000578842 1048 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC093227.2-201ENST00000589357 285 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 RNU6-89P-201ENST00000606519 100 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC091979.2-201ENST00000607514 214 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC245517.5-201ENST00000611529 162 ntBASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USPL1Q5W0Q7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 AC000374.1-201ENST00000434698 1745 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 NXPH1-205ENST00000602349 1953 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 Z95327.2-201ENST00000414579 1873 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 AC073343.1-201ENST00000328239 651 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 HSPE1P11-201ENST00000339579 310 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 Y_RNA.184-201ENST00000363884 108 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 Y_RNA.422-201ENST00000384054 114 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 HMGN1P24-201ENST00000412282 298 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 RPL23AP26-201ENST00000412728 464 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 AL161631.1-201ENST00000417933 486 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 CKS1BP6-201ENST00000424932 240 ntBASIC5.82□□□□□ -1.48
USPL1Q5W0Q7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms