Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNA5SP107-201ENST00000411358 122 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 RPS29P10-201ENST00000439197 166 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC127537.2-201ENST00000439258 465 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC010733.1-201ENST00000451515 401 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 PCNPP5-201ENST00000452246 481 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 RPL21P8-201ENST00000465083 535 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 COX7A2P2-201ENST00000505291 250 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 RPS4XP20-201ENST00000505751 772 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC116337.1-201ENST00000509680 687 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 Y_RNA.670-201ENST00000516255 105 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 Y_RNA.708-201ENST00000516950 96 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 OR8R1P-201ENST00000543943 764 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC006349.1-201ENST00000555526 235 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 MIR4472-2-201ENST00000582069 67 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC069307.1-201ENST00000602820 447 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AC020910.3-201ENST00000603701 874 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 CYP4F35P-202ENST00000636121 390 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AL049767.1-202ENST00000637826 242 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AL158163.1-201ENST00000603915 1649 ntBASIC6.23□□□□□ -1.41
RNF20Q5VTR2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF20Q5VTR2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 ZNF33CP-201ENST00000432492 2030 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AL049697.2-201ENST00000403708 294 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RNU4-61P-201ENST00000411243 107 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 CTSL3P-202ENST00000412179 788 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 BX682237.1-201ENST00000415016 335 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC009238.2-201ENST00000431026 355 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RPL36AP6-201ENST00000435770 321 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC243772.1-201ENST00000451620 410 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RPS24P6-201ENST00000452670 400 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 Z92846.1-201ENST00000456203 268 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC006967.1-201ENST00000467608 589 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC108078.2-201ENST00000510750 236 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RNU6-470P-201ENST00000515954 104 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RNU6-120P-201ENST00000516077 103 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 IGKV3D-34-201ENST00000522638 302 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC106782.4-201ENST00000568264 210 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC005191.1-201ENST00000603950 358 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AC062037.2-201ENST00000610137 73 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AL445363.3-201ENST00000623080 671 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 AL353662.3-201ENST00000625131 237 ntBASIC6.22□□□□□ -1.41
RNF20Q5VTR2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF20Q5VTR2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
RNF20Q5VTR2 AC005592.1-201ENST00000566527 1640 ntBASIC6.21□□□□□ -1.41
RNF20Q5VTR2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.21□□□□□ -1.41
RNF20Q5VTR2 SCARNA15-201ENST00000607520 4325 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 U3.3-201ENST00000362986 216 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 RNU6-450P-201ENST00000364654 107 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 RNU6-1127P-201ENST00000384580 107 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 RNU6-328P-201ENST00000390887 106 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AL590632.1-201ENST00000424289 371 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 RPL7L1P9-201ENST00000431298 745 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC236972.1-201ENST00000433225 199 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 HMGB3P21-201ENST00000452483 547 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms