Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 Y_RNA.471-201ENST00000384312 102 ntBASIC1.72□□□□□ -2.13
LRRK2Q5S007 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
LRRK2Q5S007 ATG3P1-201ENST00000419507 911 ntBASIC1.72□□□□□ -2.13
LRRK2Q5S007 AL358453.1-201ENST00000422522 250 ntBASIC1.72□□□□□ -2.13
LRRK2Q5S007 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRK2Q5S007 HMGB1P12-201ENST00000438594 598 ntBASIC1.72□□□□□ -2.13
LRRK2Q5S007 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.72□□□□□ -2.13
LRRK2Q5S007 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRK2Q5S007 AL356489.2-201ENST00000566968 3528 ntBASIC1.72□□□□□ -2.13
LRRK2Q5S007 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRK2Q5S007 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
LRRK2Q5S007 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 RNU6-1027P-201ENST00000383998 107 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC244033.1-201ENST00000426826 870 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 RPS7P2-201ENST00000435134 607 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 MTAPP1-201ENST00000489154 819 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC104564.1-201ENST00000493028 407 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 IGHV3-76-201ENST00000522465 295 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC087441.2-201ENST00000529141 262 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC244517.12-201ENST00000623581 663 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 CYP3A51P-201ENST00000633513 256 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
LRRK2Q5S007 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 SNORD114-22-201ENST00000365423 72 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AL445669.2-201ENST00000454425 421 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 DYNLL1P5-201ENST00000467158 270 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AC092851.1-201ENST00000535964 478 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 AL450489.1-201ENST00000612071 468 ntBASIC1.71□□□□□ -2.14
LRRK2Q5S007 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LRRK2Q5S007 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LRRK2Q5S007 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LRRK2Q5S007 USP9YP33-201ENST00000412220 421 ntBASIC1.7□□□□□ -2.14
LRRK2Q5S007 AC234781.4-201ENST00000419384 244 ntBASIC1.7□□□□□ -2.14
LRRK2Q5S007 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRK2Q5S007 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRK2Q5S007 USP9YP35-201ENST00000435696 412 ntBASIC1.7□□□□□ -2.14
LRRK2Q5S007 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRK2Q5S007 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.7□□□□□ -2.14
LRRK2Q5S007 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LRRK2Q5S007 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.7□□□□□ -2.14
LRRK2Q5S007 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 DEFA7P-201ENST00000382676 285 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 RPL23AP39-201ENST00000415533 405 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 RPL7P46-201ENST00000425129 740 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AL512598.1-201ENST00000610158 273 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC092650.2-201ENST00000619984 902 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC009501.3-201ENST00000605001 1352 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 AL021368.2-201ENST00000606125 5352 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC027124.2-201ENST00000428249 105 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 RN7SL297P-201ENST00000483161 293 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 HMGB1P41-201ENST00000520234 440 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AP002748.2-201ENST00000528671 348 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 RFPL1S-203ENST00000539579 330 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 HMGB3P26-201ENST00000560051 582 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC007620.3-201ENST00000608131 497 ntBASIC1.69□□□□□ -2.14
LRRK2Q5S007 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 Z98749.2-208ENST00000381646 500 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 MIR3074-201ENST00000384885 81 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 AC002524.1-201ENST00000411687 547 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 RNU6-249P-201ENST00000363016 102 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 SNORA48.3-201ENST00000391081 134 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LRRK2Q5S007 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK2Q5S007 SNRPGP19-201ENST00000603826 189 ntBASIC1.68□□□□□ -2.14
LRRK2Q5S007 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LRRK2Q5S007 SNORA70.7-201ENST00000384159 133 ntBASIC1.67□□□□□ -2.14
LRRK2Q5S007 AL445213.1-201ENST00000412589 747 ntBASIC1.67□□□□□ -2.14
LRRK2Q5S007 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.67□□□□□ -2.14
LRRK2Q5S007 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.67□□□□□ -2.14
LRRK2Q5S007 RPL9P33-201ENST00000484311 566 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms