Protein–RNA interactions for Protein: Q4G0X9

CCDC40, Coiled-coil domain-containing protein 40, humanhuman

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40Q4G0X9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AL391156.1-201ENST00000554965 554 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC245036.5-201ENST00000596330 847 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 PRELID3BP8-201ENST00000604148 295 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 MIR92B-201ENST00000607575 96 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC004832.5-201ENST00000608677 401 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC100793.4-201ENST00000613683 429 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC073348.1-201ENST00000623002 331 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC090897.3-201ENST00000636973 1157 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC107982.1-201ENST00000507171 1300 ntBASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC40Q4G0X9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 SNRPEP3-201ENST00000338402 276 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 RNU6-216P-201ENST00000363282 104 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 RNU5D-1-201ENST00000363299 116 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 SAR1AP2-201ENST00000392696 594 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC110754.1-201ENST00000399740 601 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AL161449.1-201ENST00000414531 1199 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 RPL21P32-201ENST00000419877 477 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 RPS12P18-201ENST00000442381 270 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 RPL21P8-201ENST00000465083 535 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 MTCYBP16-201ENST00000509187 1129 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC010625.1-201ENST00000511296 403 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC104986.1-201ENST00000517978 436 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AL390838.2-201ENST00000602394 274 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC096947.1-201ENST00000603233 470 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 CYCSP41-201ENST00000616920 296 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC123767.1-202ENST00000620407 817 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 AC006111.3-201ENST00000622137 383 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 MTND5P7-201ENST00000413558 1798 ntBASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC40Q4G0X9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 RNU4-51P-201ENST00000364206 140 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AL355143.1-201ENST00000407101 841 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 BMS1P22-201ENST00000414726 313 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AL449283.1-202ENST00000418249 604 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 RPL7P30-201ENST00000420888 709 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AL050321.1-201ENST00000432363 400 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 MTCYBP34-201ENST00000439552 670 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 MTCYBP11-201ENST00000447254 1109 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 PRDX3P3-201ENST00000447765 522 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 RPL39P6-201ENST00000448289 150 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 UQCRHP3-201ENST00000451503 251 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 RPL23AP31-201ENST00000456160 467 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 RN7SL863P-201ENST00000462370 296 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 RNU6-276P-201ENST00000516114 96 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 FAM60BP-201ENST00000578364 658 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 ELOCP35-201ENST00000604289 336 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC023158.2-201ENST00000614876 543 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AL158163.2-201ENST00000619110 700 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AL049777.1-201ENST00000622740 518 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC120349.2-201ENST00000625002 298 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 AC004808.1-201ENST00000627671 721 ntBASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC40Q4G0X9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CCDC40Q4G0X9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms