Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.554-201ENST00000384672 102 ntBASIC3.14□□□□□ -1.91
LMO4P61968 MIR7-3-201ENST00000384898 110 ntBASIC3.14□□□□□ -1.91
LMO4P61968 Y_RNA.582-201ENST00000391023 95 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL023807.1-201ENST00000407932 359 ntBASIC3.14□□□□□ -1.91
LMO4P61968 RPL17P12-201ENST00000413391 526 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL136133.1-201ENST00000413694 376 ntBASIC3.14□□□□□ -1.91
LMO4P61968 FCF1P2-201ENST00000415284 583 ntBASIC3.14□□□□□ -1.91
LMO4P61968 CRYBB2P1-203ENST00000415709 538 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 AL512649.1-201ENST00000428997 581 ntBASIC3.14□□□□□ -1.91
LMO4P61968 RPS6P12-201ENST00000432491 726 ntBASIC3.14□□□□□ -1.91
LMO4P61968 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 USP9YP7-201ENST00000436723 430 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL022238.1-201ENST00000442557 355 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.14□□□□□ -1.91
LMO4P61968 WASF1P1-201ENST00000447560 1131 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL451050.1-201ENST00000450126 415 ntBASIC3.14□□□□□ -1.91
LMO4P61968 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.14□□□□□ -1.91
LMO4P61968 USP9YP32-201ENST00000452432 430 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL359385.1-201ENST00000456509 365 ntBASIC3.14□□□□□ -1.91
LMO4P61968 HMGB3P30-201ENST00000457863 606 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AP000797.1-201ENST00000478870 387 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.14□□□□□ -1.91
LMO4P61968 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO4P61968 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 SLC2A13P1-201ENST00000531560 322 ntBASIC3.14□□□□□ -1.91
LMO4P61968 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO4P61968 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.14□□□□□ -1.91
LMO4P61968 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO4P61968 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
LMO4P61968 ZNF519P2-201ENST00000557032 169 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.14□□□□□ -1.91
LMO4P61968 MIR3944-201ENST00000581277 108 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AP001004.1-201ENST00000582468 324 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.14□□□□□ -1.91
LMO4P61968 AC244505.7-201ENST00000599675 272 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL596327.1-201ENST00000603629 213 ntBASIC3.14□□□□□ -1.91
LMO4P61968 SNORA62.6-201ENST00000606322 83 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC098614.4-201ENST00000607601 462 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC069200.1-201ENST00000609511 323 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
LMO4P61968 C2orf27A-204ENST00000623058 969 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC022140.2-201ENST00000623500 188 ntBASIC3.14□□□□□ -1.91
LMO4P61968 AC079228.1-201ENST00000624774 1049 ntBASIC3.14□□□□□ -1.91
LMO4P61968 OR5AK4P-201ENST00000635912 903 ntBASIC3.14□□□□□ -1.91
LMO4P61968 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
LMO4P61968 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.14□□□□□ -1.91
LMO4P61968 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMO4P61968 ELF2P3-201ENST00000445099 1506 ntBASIC3.14□□□□□ -1.91
LMO4P61968 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 RNU6-492P-201ENST00000363035 104 ntBASIC3.13□□□□□ -1.91
LMO4P61968 SNORA70.4-201ENST00000365509 134 ntBASIC3.13□□□□□ -1.91
LMO4P61968 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 RNU6-297P-201ENST00000384636 107 ntBASIC3.13□□□□□ -1.91
LMO4P61968 RPL17P50-201ENST00000396131 546 ntBASIC3.13□□□□□ -1.91
LMO4P61968 RPL7P60-201ENST00000397636 735 ntBASIC3.13□□□□□ -1.91
LMO4P61968 EIF5P1-201ENST00000400019 1231 ntBASIC3.13□□□□□ -1.91
LMO4P61968 RPS3AP24-201ENST00000407896 734 ntBASIC3.13□□□□□ -1.91
LMO4P61968 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.13□□□□□ -1.91
LMO4P61968 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 USP9YP18-201ENST00000425912 695 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.13□□□□□ -1.91
LMO4P61968 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.13□□□□□ -1.91
LMO4P61968 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 RPL18AP17-201ENST00000455326 198 ntBASIC3.13□□□□□ -1.91
LMO4P61968 TRBV26-201ENST00000456572 344 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AL121769.1-201ENST00000469473 401 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC010301.1-201ENST00000473936 355 ntBASIC3.13□□□□□ -1.91
LMO4P61968 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.13□□□□□ -1.91
LMO4P61968 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
LMO4P61968 RPL9P6-201ENST00000492764 598 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AL358832.1-201ENST00000497800 389 ntBASIC3.13□□□□□ -1.91
LMO4P61968 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.13□□□□□ -1.91
LMO4P61968 PRDX4P1-201ENST00000507189 574 ntBASIC3.13□□□□□ -1.91
LMO4P61968 HMGB1P28-201ENST00000507778 552 ntBASIC3.13□□□□□ -1.91
LMO4P61968 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LMO4P61968 AC104619.4-201ENST00000510773 249 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms