Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC011460.1-201ENST00000636268 1834 ntBASIC4.53□□□□□ -1.68
RHBDL3P58872 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RHBDL3P58872 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RHBDL3P58872 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDL3P58872 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
RHBDL3P58872 RPS3AP24-201ENST00000407896 734 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDL3P58872 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDL3P58872 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC011742.1-201ENST00000431448 434 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDL3P58872 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDL3P58872 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC106707.2-201ENST00000484182 374 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDL3P58872 HMGB3P15-201ENST00000507326 574 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 HSPE1P23-201ENST00000509838 286 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AC104619.4-201ENST00000510773 249 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AL359273.1-201ENST00000510918 627 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC013828.2-201ENST00000532487 235 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDL3P58872 AC055876.1-202ENST00000567053 138 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AC007671.2-201ENST00000637344 619 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 AC009902.3-201ENST00000606235 2172 ntBASIC4.52□□□□□ -1.69
RHBDL3P58872 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RHBDL3P58872 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDL3P58872 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDL3P58872 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.51□□□□□ -1.69
RHBDL3P58872 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC091152.2-201ENST00000591628 2569 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RHBDL3P58872 RNU6-114P-201ENST00000384704 105 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RHBDL3P58872 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 BX119904.4-201ENST00000424402 301 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 MTATP6P4-201ENST00000427725 675 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 PDSS1P2-201ENST00000449397 678 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 OR6K1P-201ENST00000456766 971 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 AC084198.1-201ENST00000477747 402 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 RNA5SP208-201ENST00000516156 78 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 RNA5SP164-201ENST00000516533 110 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.51□□□□□ -1.69
RHBDL3P58872 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.51□□□□□ -1.69
RHBDL3P58872 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC110741.2-201ENST00000605278 268 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 AL110115.1-201ENST00000614396 364 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 AL591424.2-201ENST00000617023 128 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDL3P58872 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 AC119674.1-207ENST00000641355 633 ntBASIC4.51□□□□□ -1.69
RHBDL3P58872 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDL3P58872 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RHBDL3P58872 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDL3P58872 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AC090740.1-201ENST00000623193 2262 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 RNU6-500P-201ENST00000362349 107 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 RNU6-223P-201ENST00000362830 107 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDL3P58872 RNU6-516P-201ENST00000411381 104 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AC068533.1-201ENST00000418542 415 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDL3P58872 CETN4P-201ENST00000432407 469 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 HMGN2P31-201ENST00000432430 273 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AC091862.1-201ENST00000438016 1100 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDL3P58872 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDL3P58872 RPL30P6-201ENST00000475925 342 ntBASIC4.5□□□□□ -1.69
RHBDL3P58872 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDL3P58872 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDL3P58872 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms