Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 snoZ278.1-201ENST00000517059 112 ntBASIC3.07□□□□□ -1.92
CDH4P55283 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CDH4P55283 AP001804.3-201ENST00000525146 880 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC022080.3-201ENST00000544433 482 ntBASIC3.07□□□□□ -1.92
CDH4P55283 MTCYBP27-201ENST00000555160 670 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH4P55283 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH4P55283 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH4P55283 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH4P55283 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH4P55283 AC010738.1-201ENST00000604970 987 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC093732.2-201ENST00000607950 274 ntBASIC3.07□□□□□ -1.92
CDH4P55283 ATP5A1P2-202ENST00000616464 443 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC006111.3-201ENST00000622137 383 ntBASIC3.07□□□□□ -1.92
CDH4P55283 AC090897.3-201ENST00000636973 1157 ntBASIC3.07□□□□□ -1.92
CDH4P55283 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH4P55283 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH4P55283 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH4P55283 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CDH4P55283 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH4P55283 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
CDH4P55283 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH4P55283 API5P2-201ENST00000397055 1498 ntBASIC3.06□□□□□ -1.92
CDH4P55283 RNU6-1077P-201ENST00000410506 102 ntBASIC3.06□□□□□ -1.92
CDH4P55283 Z92545.1-201ENST00000411782 234 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC096664.2-201ENST00000411843 406 ntBASIC3.06□□□□□ -1.92
CDH4P55283 MTCO1P23-201ENST00000415223 1526 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
CDH4P55283 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH4P55283 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AC022018.1-201ENST00000430685 241 ntBASIC3.06□□□□□ -1.92
CDH4P55283 SETP8-201ENST00000435341 628 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC092393.1-201ENST00000439625 742 ntBASIC3.06□□□□□ -1.92
CDH4P55283 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH4P55283 RPL36AP33-201ENST00000450395 310 ntBASIC3.06□□□□□ -1.92
CDH4P55283 RNA5SP310-201ENST00000459084 116 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH4P55283 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 DSTNP2-201ENST00000504533 515 ntBASIC3.06□□□□□ -1.92
CDH4P55283 CBX3P3-201ENST00000508108 532 ntBASIC3.06□□□□□ -1.92
CDH4P55283 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH4P55283 SNORD59.2-201ENST00000516873 68 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AC068657.1-201ENST00000520807 306 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH4P55283 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH4P55283 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AC107016.2-201ENST00000547968 190 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH4P55283 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AC103988.1-201ENST00000566382 2177 ntBASIC3.06□□□□□ -1.92
CDH4P55283 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
CDH4P55283 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH4P55283 MTATP6P2-201ENST00000603319 678 ntBASIC3.06□□□□□ -1.92
CDH4P55283 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH4P55283 AL353748.2-201ENST00000622148 471 ntBASIC3.06□□□□□ -1.92
CDH4P55283 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH4P55283 AC080188.3-201ENST00000624842 748 ntBASIC3.06□□□□□ -1.92
CDH4P55283 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH4P55283 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CDH4P55283 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDH4P55283 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.05□□□□□ -1.92
CDH4P55283 SNORA44-201ENST00000384584 132 ntBASIC3.05□□□□□ -1.92
CDH4P55283 ARF4P3-201ENST00000397387 509 ntBASIC3.05□□□□□ -1.92
CDH4P55283 UBA52P6-201ENST00000399822 382 ntBASIC3.05□□□□□ -1.92
CDH4P55283 AL355615.1-201ENST00000406187 641 ntBASIC3.05□□□□□ -1.92
CDH4P55283 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH4P55283 RPL21P32-201ENST00000419877 477 ntBASIC3.05□□□□□ -1.92
CDH4P55283 HSPE1P1-201ENST00000421494 318 ntBASIC3.05□□□□□ -1.92
CDH4P55283 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH4P55283 AL589880.1-201ENST00000448271 287 ntBASIC3.05□□□□□ -1.92
CDH4P55283 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH4P55283 BOLA3P3-201ENST00000505182 232 ntBASIC3.05□□□□□ -1.92
CDH4P55283 AC026412.2-201ENST00000512270 1075 ntBASIC3.05□□□□□ -1.92
CDH4P55283 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH4P55283 RNU6-1095P-201ENST00000516148 108 ntBASIC3.05□□□□□ -1.92
CDH4P55283 OR5G4P-201ENST00000525251 760 ntBASIC3.05□□□□□ -1.92
CDH4P55283 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH4P55283 AC068339.2-201ENST00000534395 618 ntBASIC3.05□□□□□ -1.92
CDH4P55283 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH4P55283 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH4P55283 AC122134.1-202ENST00000569111 1201 ntBASIC3.05□□□□□ -1.92
CDH4P55283 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH4P55283 AC135507.2-201ENST00000612443 309 ntBASIC3.05□□□□□ -1.92
CDH4P55283 AC231759.1-201ENST00000616455 597 ntBASIC3.05□□□□□ -1.92
CDH4P55283 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH4P55283 MFSD8-245ENST00000641743 948 ntBASIC3.05□□□□□ -1.92
CDH4P55283 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH4P55283 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDH4P55283 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH4P55283 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CDH4P55283 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDH4P55283 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH4P55283 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH4P55283 RNU6-173P-201ENST00000364215 104 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms