Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.41□□□□□ -1.86
SMARCA4P51532 HMGB3P15-201ENST00000507326 574 ntBASIC3.41□□□□□ -1.86
SMARCA4P51532 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCA4P51532 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.41□□□□□ -1.86
SMARCA4P51532 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCA4P51532 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.41□□□□□ -1.86
SMARCA4P51532 AC010678.1-201ENST00000614118 713 ntBASIC3.41□□□□□ -1.86
SMARCA4P51532 AL353746.1-201ENST00000566293 6881 ntBASIC3.4□□□□□ -1.87
SMARCA4P51532 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.4□□□□□ -1.87
SMARCA4P51532 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.4□□□□□ -1.87
SMARCA4P51532 MIR3670-2-201ENST00000582974 65 ntBASIC3.4□□□□□ -1.87
SMARCA4P51532 MIR3670-1-201ENST00000584160 65 ntBASIC3.4□□□□□ -1.87
SMARCA4P51532 MIR3670-3-201ENST00000584855 65 ntBASIC3.4□□□□□ -1.87
SMARCA4P51532 MIR3670-4-201ENST00000612260 65 ntBASIC3.4□□□□□ -1.87
SMARCA4P51532 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
SMARCA4P51532 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.39□□□□□ -1.87
SMARCA4P51532 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SMARCA4P51532 TRIM60P18-201ENST00000441518 828 ntBASIC3.39□□□□□ -1.87
SMARCA4P51532 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.39□□□□□ -1.87
SMARCA4P51532 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SMARCA4P51532 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.39□□□□□ -1.87
SMARCA4P51532 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.39□□□□□ -1.87
SMARCA4P51532 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.39□□□□□ -1.87
SMARCA4P51532 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMARCA4P51532 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMARCA4P51532 AL109809.4-201ENST00000603520 2185 ntBASIC3.39□□□□□ -1.87
SMARCA4P51532 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCA4P51532 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCA4P51532 SET-203ENST00000372688 801 ntTSL 2 BASIC3.38□□□□□ -1.87
SMARCA4P51532 RPS15AP12-201ENST00000419498 388 ntBASIC3.38□□□□□ -1.87
SMARCA4P51532 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.38□□□□□ -1.87
SMARCA4P51532 AC011352.3-201ENST00000505162 593 ntBASIC3.38□□□□□ -1.87
SMARCA4P51532 OR5D17P-201ENST00000531492 978 ntBASIC3.38□□□□□ -1.87
SMARCA4P51532 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
SMARCA4P51532 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.38□□□□□ -1.87
SMARCA4P51532 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCA4P51532 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCA4P51532 Y_RNA.122-201ENST00000363331 96 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 AL590084.1-201ENST00000407885 387 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCA4P51532 GZMAP1-201ENST00000503054 631 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCA4P51532 AC025881.1-201ENST00000518851 512 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 SUB1P3-201ENST00000564581 315 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCA4P51532 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCA4P51532 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCA4P51532 SNORA67.5-201ENST00000391036 107 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.37□□□□□ -1.87
SMARCA4P51532 TMEM248P1-201ENST00000510579 951 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.37□□□□□ -1.87
SMARCA4P51532 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCA4P51532 AC026241.1-201ENST00000517873 2142 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 RPS3AP4-201ENST00000555161 764 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCA4P51532 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.37□□□□□ -1.87
SMARCA4P51532 RPP40P2-201ENST00000603596 712 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.37□□□□□ -1.87
SMARCA4P51532 AC009452.1-201ENST00000640823 606 ntBASIC3.37□□□□□ -1.87
SMARCA4P51532 AP000275.1-201ENST00000411943 390 ntBASIC3.36□□□□□ -1.87
SMARCA4P51532 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCA4P51532 SEC63P1-201ENST00000425785 1258 ntBASIC3.36□□□□□ -1.87
SMARCA4P51532 HMGB1P31-201ENST00000437242 427 ntBASIC3.36□□□□□ -1.87
SMARCA4P51532 TRMT112P2-201ENST00000512910 132 ntBASIC3.36□□□□□ -1.87
SMARCA4P51532 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.36□□□□□ -1.87
SMARCA4P51532 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.36□□□□□ -1.87
SMARCA4P51532 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.36□□□□□ -1.87
SMARCA4P51532 MTCO1P14-201ENST00000441695 1559 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMARCA4P51532 DYNLT3P1-201ENST00000378574 347 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 AC013268.2-201ENST00000420753 337 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 Z73417.1-201ENST00000447373 778 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 MTCO1P42-201ENST00000457379 726 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 AL163540.1-201ENST00000485382 386 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 AC068781.1-201ENST00000488231 618 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SMARCA4P51532 TTC39CP1-201ENST00000512513 755 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.35□□□□□ -1.87
SMARCA4P51532 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.35□□□□□ -1.87
SMARCA4P51532 AC105036.1-201ENST00000566222 271 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 AL589994.2-201ENST00000621124 579 ntBASIC3.35□□□□□ -1.87
SMARCA4P51532 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.35□□□□□ -1.87
SMARCA4P51532 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMARCA4P51532 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMARCA4P51532 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMARCA4P51532 U3.37-201ENST00000408528 213 ntBASIC3.34□□□□□ -1.87
SMARCA4P51532 RPL34P26-201ENST00000445636 354 ntBASIC3.34□□□□□ -1.87
SMARCA4P51532 AC104435.1-201ENST00000483483 166 ntBASIC3.34□□□□□ -1.87
SMARCA4P51532 SNORA25.15-201ENST00000516487 89 ntBASIC3.34□□□□□ -1.87
SMARCA4P51532 RNA5SP480-201ENST00000516840 109 ntBASIC3.34□□□□□ -1.87
SMARCA4P51532 COX6CP5-201ENST00000527162 228 ntBASIC3.34□□□□□ -1.87
SMARCA4P51532 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMARCA4P51532 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.34□□□□□ -1.87
SMARCA4P51532 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.34□□□□□ -1.87
SMARCA4P51532 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.34□□□□□ -1.87
SMARCA4P51532 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.88
SMARCA4P51532 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
SMARCA4P51532 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCA4P51532 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms