Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 USP9YP27-201ENST00000418455 438 ntBASIC3.8□□□□□ -1.8
SOX2P48431 MTCO1P20-201ENST00000425366 358 ntBASIC3.8□□□□□ -1.8
SOX2P48431 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
SOX2P48431 VN1R34P-201ENST00000447387 883 ntBASIC3.8□□□□□ -1.8
SOX2P48431 TPT1P14-201ENST00000448018 505 ntBASIC3.8□□□□□ -1.8
SOX2P48431 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 AP000926.1-201ENST00000479573 241 ntBASIC3.8□□□□□ -1.8
SOX2P48431 VWA8P1-201ENST00000510889 176 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.8□□□□□ -1.8
SOX2P48431 FTH1P21-201ENST00000512179 511 ntBASIC3.8□□□□□ -1.8
SOX2P48431 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 Y_RNA.704-201ENST00000516851 102 ntBASIC3.8□□□□□ -1.8
SOX2P48431 RNU6-798P-201ENST00000516912 103 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 OR4R3P-201ENST00000525084 838 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AC118273.2-201ENST00000532092 465 ntBASIC3.8□□□□□ -1.8
SOX2P48431 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.8□□□□□ -1.8
SOX2P48431 CR383656.7-201ENST00000548164 174 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.8□□□□□ -1.8
SOX2P48431 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.8□□□□□ -1.8
SOX2P48431 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.8□□□□□ -1.8
SOX2P48431 RPL12P25-202ENST00000598100 674 ntBASIC3.8□□□□□ -1.8
SOX2P48431 BNIP3P33-201ENST00000598912 569 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AC067959.1-201ENST00000604334 379 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AL031176.1-201ENST00000604554 466 ntBASIC3.8□□□□□ -1.8
SOX2P48431 MIR432-201ENST00000606207 94 ntBASIC3.8□□□□□ -1.8
SOX2P48431 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 AC002553.4-201ENST00000616896 331 ntBASIC3.8□□□□□ -1.8
SOX2P48431 AL356585.4-201ENST00000623078 1229 ntBASIC3.8□□□□□ -1.8
SOX2P48431 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.8□□□□□ -1.8
SOX2P48431 MIR1321-201ENST00000637766 79 ntBASIC3.8□□□□□ -1.8
SOX2P48431 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 AL138713.1-201ENST00000624026 2130 ntBASIC3.8□□□□□ -1.8
SOX2P48431 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SOX2P48431 SDAD1P1-202ENST00000524156 2051 ntBASIC3.8□□□□□ -1.8
SOX2P48431 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 AC026951.1-201ENST00000559530 2459 ntBASIC3.8□□□□□ -1.8
SOX2P48431 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SOX2P48431 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
SOX2P48431 MTCO1P9-201ENST00000505577 1534 ntBASIC3.8□□□□□ -1.8
SOX2P48431 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SOX2P48431 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
SOX2P48431 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SOX2P48431 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SOX2P48431 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX2P48431 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SOX2P48431 AL133412.1-201ENST00000380194 2992 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SOX2P48431 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.79□□□□□ -1.8
SOX2P48431 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SOX2P48431 RNU6-169P-201ENST00000365336 107 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RNY3P13-201ENST00000365542 102 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RNU6-278P-201ENST00000390945 109 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RNU11-4P-201ENST00000391149 133 ntBASIC3.79□□□□□ -1.8
SOX2P48431 LAP3P1-201ENST00000403648 294 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RNU4-34P-201ENST00000410431 124 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RN7SKP177-201ENST00000410567 355 ntBASIC3.79□□□□□ -1.8
SOX2P48431 RN7SKP106-201ENST00000410832 272 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC092447.6-201ENST00000414578 210 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC016769.2-201ENST00000414815 475 ntBASIC3.79□□□□□ -1.8
SOX2P48431 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.79□□□□□ -1.8
SOX2P48431 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AL161631.1-201ENST00000417933 486 ntBASIC3.79□□□□□ -1.8
SOX2P48431 MTATP6P18-201ENST00000417994 673 ntBASIC3.79□□□□□ -1.8
SOX2P48431 HMGB3P20-201ENST00000417997 600 ntBASIC3.79□□□□□ -1.8
SOX2P48431 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.79□□□□□ -1.8
SOX2P48431 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.79□□□□□ -1.8
SOX2P48431 RPS17P13-201ENST00000448974 407 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC009963.2-201ENST00000453431 138 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX2P48431 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX2P48431 AC108145.1-201ENST00000503770 153 ntBASIC3.79□□□□□ -1.8
SOX2P48431 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.79□□□□□ -1.8
SOX2P48431 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.79□□□□□ -1.8
SOX2P48431 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.79□□□□□ -1.8
SOX2P48431 AC021146.1-201ENST00000511202 716 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.79□□□□□ -1.8
SOX2P48431 AP003072.2-201ENST00000527756 676 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AP001781.1-201ENST00000530977 207 ntBASIC3.79□□□□□ -1.8
SOX2P48431 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.79□□□□□ -1.8
SOX2P48431 AL139395.1-201ENST00000603662 160 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AL136363.1-201ENST00000605349 337 ntBASIC3.79□□□□□ -1.8
SOX2P48431 AC012603.1-201ENST00000606424 528 ntBASIC3.79□□□□□ -1.8
SOX2P48431 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX2P48431 AC245517.5-201ENST00000611529 162 ntBASIC3.79□□□□□ -1.8
SOX2P48431 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SOX2P48431 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.79□□□□□ -1.8
SOX2P48431 MIR6891-201ENST00000618788 93 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms