Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.2□□□□□ -1.9
SSR1P43307 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
SSR1P43307 RPL37P25-201ENST00000507308 276 ntBASIC3.2□□□□□ -1.9
SSR1P43307 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.2□□□□□ -1.9
SSR1P43307 CDC42P4-201ENST00000510507 563 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSR1P43307 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSR1P43307 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.2□□□□□ -1.9
SSR1P43307 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.2□□□□□ -1.9
SSR1P43307 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.2□□□□□ -1.9
SSR1P43307 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 AP001330.4-201ENST00000604350 154 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AL049779.4-201ENST00000604500 156 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AC128687.1-201ENST00000605304 619 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AP000238.1-201ENST00000608759 426 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AC084757.4-201ENST00000616350 526 ntBASIC3.2□□□□□ -1.9
SSR1P43307 AC009318.4-201ENST00000620496 486 ntBASIC3.2□□□□□ -1.9
SSR1P43307 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SSR1P43307 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SSR1P43307 AC135776.4-201ENST00000624300 1904 ntBASIC3.19□□□□□ -1.9
SSR1P43307 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSR1P43307 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.19□□□□□ -1.9
SSR1P43307 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.19□□□□□ -1.9
SSR1P43307 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
SSR1P43307 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSR1P43307 SNORA71.3-201ENST00000362582 128 ntBASIC3.19□□□□□ -1.9
SSR1P43307 Y_RNA.110-201ENST00000363220 99 ntBASIC3.19□□□□□ -1.9
SSR1P43307 RNU5B-1-201ENST00000363286 116 ntBASIC3.19□□□□□ -1.9
SSR1P43307 RNU6-115P-201ENST00000364310 107 ntBASIC3.19□□□□□ -1.9
SSR1P43307 RNA5SP72-201ENST00000364442 117 ntBASIC3.19□□□□□ -1.9
SSR1P43307 RNU6-207P-201ENST00000384137 107 ntBASIC3.19□□□□□ -1.9
SSR1P43307 RNVU1-14-201ENST00000384770 164 ntBASIC3.19□□□□□ -1.9
SSR1P43307 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AL133264.1-201ENST00000407157 562 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AL023807.1-201ENST00000407932 359 ntBASIC3.19□□□□□ -1.9
SSR1P43307 RNU4-47P-201ENST00000410876 114 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.19□□□□□ -1.9
SSR1P43307 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.19□□□□□ -1.9
SSR1P43307 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.19□□□□□ -1.9
SSR1P43307 AC006548.1-201ENST00000427470 102 ntBASIC3.19□□□□□ -1.9
SSR1P43307 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.19□□□□□ -1.9
SSR1P43307 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.19□□□□□ -1.9
SSR1P43307 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.19□□□□□ -1.9
SSR1P43307 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.19□□□□□ -1.9
SSR1P43307 FTH1P2-201ENST00000466086 412 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.19□□□□□ -1.9
SSR1P43307 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC008716.1-201ENST00000511084 513 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AC074250.1-201ENST00000511117 192 ntBASIC3.19□□□□□ -1.9
SSR1P43307 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.19□□□□□ -1.9
SSR1P43307 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC025881.1-201ENST00000518851 512 ntBASIC3.19□□□□□ -1.9
SSR1P43307 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSR1P43307 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.19□□□□□ -1.9
SSR1P43307 CCNG2P1-201ENST00000549521 1000 ntBASIC3.19□□□□□ -1.9
SSR1P43307 LSM6P2-201ENST00000552208 177 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AC122134.1-202ENST00000569111 1201 ntBASIC3.19□□□□□ -1.9
SSR1P43307 LARP7P2-201ENST00000575306 125 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.19□□□□□ -1.9
SSR1P43307 AC090330.1-201ENST00000588646 764 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AC008739.2-201ENST00000597006 317 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AP002906.1-201ENST00000603405 233 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AP005137.2-201ENST00000609238 400 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.19□□□□□ -1.9
SSR1P43307 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSR1P43307 MIR7112-201ENST00000616126 65 ntBASIC3.19□□□□□ -1.9
SSR1P43307 CR381572.1-201ENST00000625098 102 ntBASIC3.19□□□□□ -1.9
SSR1P43307 AC139713.2-210ENST00000641741 992 ntBASIC3.19□□□□□ -1.9
SSR1P43307 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSR1P43307 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.18□□□□□ -1.9
SSR1P43307 SGO1P2-201ENST00000429458 1589 ntBASIC3.18□□□□□ -1.9
SSR1P43307 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
SSR1P43307 RNA5SP267-201ENST00000364893 126 ntBASIC3.18□□□□□ -1.9
SSR1P43307 SNORA7.4-201ENST00000384249 137 ntBASIC3.18□□□□□ -1.9
SSR1P43307 SNORA1.3-201ENST00000384676 136 ntBASIC3.18□□□□□ -1.9
SSR1P43307 SNORA48.7-201ENST00000391302 135 ntBASIC3.18□□□□□ -1.9
SSR1P43307 ANAPC10P1-201ENST00000395991 556 ntBASIC3.18□□□□□ -1.9
SSR1P43307 RPL31P1-201ENST00000398116 372 ntBASIC3.18□□□□□ -1.9
SSR1P43307 RNA5SP120-201ENST00000410900 112 ntBASIC3.18□□□□□ -1.9
SSR1P43307 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR1P43307 BOLA3P4-201ENST00000418151 400 ntBASIC3.18□□□□□ -1.9
SSR1P43307 MTCYBP32-201ENST00000427945 1084 ntBASIC3.18□□□□□ -1.9
SSR1P43307 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR1P43307 AC044797.1-201ENST00000445744 679 ntBASIC3.18□□□□□ -1.9
SSR1P43307 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR1P43307 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.18□□□□□ -1.9
SSR1P43307 AC093767.1-201ENST00000504523 156 ntBASIC3.18□□□□□ -1.9
SSR1P43307 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms