Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP8P40818 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP8P40818 RPL21P132-201ENST00000331267 462 ntBASIC3.85□□□□□ -1.79
USP8P40818 AL672167.1-206ENST00000356293 943 ntBASIC3.85□□□□□ -1.79
USP8P40818 Y_RNA.77-201ENST00000362962 107 ntBASIC3.85□□□□□ -1.79
USP8P40818 RNA5SP42-201ENST00000364278 115 ntBASIC3.85□□□□□ -1.79
USP8P40818 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
USP8P40818 AL136116.1-201ENST00000403591 381 ntBASIC3.85□□□□□ -1.79
USP8P40818 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.85□□□□□ -1.79
USP8P40818 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.85□□□□□ -1.79
USP8P40818 AL035423.1-201ENST00000420331 213 ntBASIC3.85□□□□□ -1.79
USP8P40818 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 AC098826.1-201ENST00000433943 471 ntBASIC3.85□□□□□ -1.79
USP8P40818 LARP1BP3-201ENST00000437229 869 ntBASIC3.85□□□□□ -1.79
USP8P40818 VN1R10P-201ENST00000447106 875 ntBASIC3.85□□□□□ -1.79
USP8P40818 MTND2P19-201ENST00000449129 1012 ntBASIC3.85□□□□□ -1.79
USP8P40818 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 AC009961.3-201ENST00000449832 765 ntBASIC3.85□□□□□ -1.79
USP8P40818 HMGN3P1-201ENST00000453847 193 ntBASIC3.85□□□□□ -1.79
USP8P40818 RPL37P6-202ENST00000464216 403 ntBASIC3.85□□□□□ -1.79
USP8P40818 FTH1P2-201ENST00000466086 412 ntBASIC3.85□□□□□ -1.79
USP8P40818 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 AC110792.2-201ENST00000510278 224 ntBASIC3.85□□□□□ -1.79
USP8P40818 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.85□□□□□ -1.79
USP8P40818 Y_RNA.655-201ENST00000515919 96 ntBASIC3.85□□□□□ -1.79
USP8P40818 RN7SKP234-201ENST00000517173 224 ntBASIC3.85□□□□□ -1.79
USP8P40818 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.85□□□□□ -1.79
USP8P40818 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP8P40818 SULT1C2P1-202ENST00000562418 459 ntBASIC3.85□□□□□ -1.79
USP8P40818 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.85□□□□□ -1.79
USP8P40818 AC020914.6-201ENST00000594327 272 ntBASIC3.85□□□□□ -1.79
USP8P40818 AL451086.1-201ENST00000605596 223 ntBASIC3.85□□□□□ -1.79
USP8P40818 AL359535.1-201ENST00000612100 1087 ntBASIC3.85□□□□□ -1.79
USP8P40818 AL158063.1-201ENST00000615349 536 ntBASIC3.85□□□□□ -1.79
USP8P40818 AC231657.1-201ENST00000624313 397 ntBASIC3.85□□□□□ -1.79
USP8P40818 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.85□□□□□ -1.79
USP8P40818 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP8P40818 AC005183.1-201ENST00000603687 1979 ntBASIC3.85□□□□□ -1.79
USP8P40818 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP8P40818 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.85□□□□□ -1.79
USP8P40818 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.85□□□□□ -1.79
USP8P40818 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
USP8P40818 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP8P40818 RNU6-433P-201ENST00000363216 104 ntBASIC3.84□□□□□ -1.79
USP8P40818 RNU4-24P-201ENST00000364565 139 ntBASIC3.84□□□□□ -1.79
USP8P40818 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP8P40818 MIR506-201ENST00000384998 124 ntBASIC3.84□□□□□ -1.79
USP8P40818 RPS3AP26-201ENST00000398259 784 ntBASIC3.84□□□□□ -1.79
USP8P40818 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP8P40818 AC008065.1-201ENST00000428525 348 ntBASIC3.84□□□□□ -1.79
USP8P40818 DLGAP5P1-201ENST00000430307 464 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC023347.2-201ENST00000433994 462 ntBASIC3.84□□□□□ -1.79
USP8P40818 BX679664.1-201ENST00000434429 253 ntBASIC3.84□□□□□ -1.79
USP8P40818 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AL662791.1-201ENST00000441992 928 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 RPL26P28-201ENST00000451325 435 ntBASIC3.84□□□□□ -1.79
USP8P40818 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 RPL30P9-201ENST00000465586 330 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC084357.1-201ENST00000473404 255 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC087879.1-201ENST00000474343 374 ntBASIC3.84□□□□□ -1.79
USP8P40818 RAP1BP2-201ENST00000478270 544 ntBASIC3.84□□□□□ -1.79
USP8P40818 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AC090071.1-201ENST00000507713 644 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AC106038.2-201ENST00000520706 568 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 DEFB131D-201ENST00000526803 184 ntBASIC3.84□□□□□ -1.79
USP8P40818 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP8P40818 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 GTF2IP22-201ENST00000554443 182 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC106785.1-201ENST00000565935 262 ntBASIC3.84□□□□□ -1.79
USP8P40818 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.84□□□□□ -1.79
USP8P40818 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.84□□□□□ -1.79
USP8P40818 AC093227.2-201ENST00000589357 285 ntBASIC3.84□□□□□ -1.79
USP8P40818 RSL24D1P11-201ENST00000591045 491 ntBASIC3.84□□□□□ -1.79
USP8P40818 SNORA51-201ENST00000606420 132 ntBASIC3.84□□□□□ -1.79
USP8P40818 AL031775.1-201ENST00000607014 887 ntBASIC3.84□□□□□ -1.79
USP8P40818 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.84□□□□□ -1.79
USP8P40818 AC090425.2-201ENST00000608818 501 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC243773.3-201ENST00000613270 256 ntBASIC3.84□□□□□ -1.79
USP8P40818 AC011939.3-201ENST00000613686 466 ntBASIC3.84□□□□□ -1.79
USP8P40818 AL356596.1-201ENST00000624230 379 ntBASIC3.84□□□□□ -1.79
USP8P40818 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP8P40818 ZNF37BP-203ENST00000452306 1352 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms