Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 RNU2-28P-201ENST00000410457 189 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 SEPT7P5-201ENST00000434048 306 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.97□□□□□ -1.93
SHMT2P34897 MTATP6P14-201ENST00000455189 673 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC013828.1-201ENST00000481845 158 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC008885.1-201ENST00000514930 301 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 RNU6-276P-201ENST00000516114 96 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 RNA5SP341-201ENST00000516261 117 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 SNORA31.20-201ENST00000517111 133 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.97□□□□□ -1.93
SHMT2P34897 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC090502.2-201ENST00000549267 280 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC008127.2-201ENST00000549925 1075 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 H3F3AP1-201ENST00000559984 334 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.97□□□□□ -1.93
SHMT2P34897 LARP7P2-201ENST00000575306 125 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
SHMT2P34897 AL355812.1-201ENST00000603215 216 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 BNIP3P11-201ENST00000603878 563 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 DPRXP5-201ENST00000604662 539 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.97□□□□□ -1.93
SHMT2P34897 AC009237.15-201ENST00000610252 501 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 AC084824.4-201ENST00000620106 731 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC123767.1-202ENST00000620407 817 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AP001002.2-201ENST00000625137 386 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 MKKS-204ENST00000639674 192 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHMT2P34897 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SHMT2P34897 MTND5P7-201ENST00000413558 1798 ntBASIC2.97□□□□□ -1.93
SHMT2P34897 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.96□□□□□ -1.93
SHMT2P34897 Z99496.1-201ENST00000469424 1477 ntBASIC2.96□□□□□ -1.93
SHMT2P34897 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
SHMT2P34897 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHMT2P34897 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SHMT2P34897 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHMT2P34897 RPL23AP57-201ENST00000332361 466 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.96□□□□□ -1.94
SHMT2P34897 RNU6-224P-201ENST00000384055 107 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC016769.3-201ENST00000396562 315 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 ARF4P3-201ENST00000397387 509 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.96□□□□□ -1.94
SHMT2P34897 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.96□□□□□ -1.94
SHMT2P34897 CYCSP32-201ENST00000440548 321 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SHMT2P34897 MTND2P39-201ENST00000457230 764 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC010285.1-201ENST00000470580 392 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 KLRA1P-201ENST00000503499 986 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC096571.1-202ENST00000506634 735 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 HMGB3P15-201ENST00000507326 574 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.96□□□□□ -1.94
SHMT2P34897 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.96□□□□□ -1.94
SHMT2P34897 YWHAZP1-201ENST00000556286 722 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC138915.2-201ENST00000569776 97 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.96□□□□□ -1.94
SHMT2P34897 MIR3200-201ENST00000580767 85 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.96□□□□□ -1.94
SHMT2P34897 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHMT2P34897 XIAPP1-201ENST00000603162 600 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC096947.1-201ENST00000603233 470 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AP001521.1-201ENST00000609150 300 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.96□□□□□ -1.94
SHMT2P34897 AC231759.1-201ENST00000616455 597 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHMT2P34897 AC040168.1-201ENST00000623594 991 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC006963.1-201ENST00000624003 1052 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 AC013437.2-201ENST00000639587 677 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 ZNF663P-202ENST00000641770 1131 ntBASIC2.96□□□□□ -1.94
SHMT2P34897 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHMT2P34897 MTND4P9-201ENST00000507819 1346 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.95□□□□□ -1.94
SHMT2P34897 AC004925.1-201ENST00000624256 2706 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 MTCO1P23-201ENST00000415223 1526 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.95□□□□□ -1.94
SHMT2P34897 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.95□□□□□ -1.94
SHMT2P34897 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHMT2P34897 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHMT2P34897 snoZ40.1-201ENST00000364540 72 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 RNU1-140P-201ENST00000365040 165 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 SNORA54-201ENST00000384281 123 ntBASIC2.95□□□□□ -1.94
SHMT2P34897 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms