Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HOXA9P31269 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HOXA9P31269 SNORA46-201ENST00000384762 135 ntBASIC3□□□□□ -1.93
HOXA9P31269 MCTS2P-201ENST00000394552 546 ntBASIC3□□□□□ -1.93
HOXA9P31269 AL445529.1-201ENST00000398713 389 ntBASIC3□□□□□ -1.93
HOXA9P31269 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3□□□□□ -1.93
HOXA9P31269 RNU6-77P-201ENST00000410554 91 ntBASIC3□□□□□ -1.93
HOXA9P31269 UBE2V1P9-201ENST00000414760 368 ntBASIC3□□□□□ -1.93
HOXA9P31269 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
HOXA9P31269 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3□□□□□ -1.93
HOXA9P31269 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3□□□□□ -1.93
HOXA9P31269 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3□□□□□ -1.93
HOXA9P31269 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3□□□□□ -1.93
HOXA9P31269 SDR42E1P3-201ENST00000438345 502 ntBASIC3□□□□□ -1.93
HOXA9P31269 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3□□□□□ -1.93
HOXA9P31269 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC112653.1-201ENST00000443851 386 ntBASIC3□□□□□ -1.93
HOXA9P31269 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3□□□□□ -1.93
HOXA9P31269 RPL37P4-201ENST00000448908 268 ntBASIC3□□□□□ -1.93
HOXA9P31269 AL445669.2-201ENST00000454425 421 ntBASIC3□□□□□ -1.93
HOXA9P31269 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC010285.1-201ENST00000470580 392 ntBASIC3□□□□□ -1.93
HOXA9P31269 RPS23P3-201ENST00000470993 430 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3□□□□□ -1.93
HOXA9P31269 RPS27P23-201ENST00000487608 251 ntBASIC3□□□□□ -1.93
HOXA9P31269 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
HOXA9P31269 POU5F1P7-201ENST00000508759 541 ntBASIC3□□□□□ -1.93
HOXA9P31269 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3□□□□□ -1.93
HOXA9P31269 AC034159.1-201ENST00000513885 583 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
HOXA9P31269 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3□□□□□ -1.93
HOXA9P31269 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3□□□□□ -1.93
HOXA9P31269 CYB5AP5-201ENST00000549779 389 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC079600.2-201ENST00000550076 130 ntBASIC3□□□□□ -1.93
HOXA9P31269 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3□□□□□ -1.93
HOXA9P31269 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3□□□□□ -1.93
HOXA9P31269 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3□□□□□ -1.93
HOXA9P31269 AC107954.1-201ENST00000565906 727 ntBASIC3□□□□□ -1.93
HOXA9P31269 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 AC126365.2-201ENST00000580630 379 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC090312.2-201ENST00000582687 378 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3□□□□□ -1.93
HOXA9P31269 RPL23AP92-201ENST00000603609 255 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC099785.1-201ENST00000605697 437 ntBASIC3□□□□□ -1.93
HOXA9P31269 AC090617.7-201ENST00000623952 126 ntBASIC3□□□□□ -1.93
HOXA9P31269 AL590396.4-201ENST00000636779 956 ntBASIC3□□□□□ -1.93
HOXA9P31269 AL359693.1-201ENST00000614959 2407 ntBASIC3□□□□□ -1.93
HOXA9P31269 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 MTCO1P6-201ENST00000481192 1384 ntBASIC3□□□□□ -1.93
HOXA9P31269 MTND4P8-201ENST00000514997 1362 ntBASIC3□□□□□ -1.93
HOXA9P31269 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXA9P31269 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA9P31269 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXA9P31269 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA9P31269 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 RNU6-629P-201ENST00000384061 103 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXA9P31269 AL009174.1-201ENST00000426577 416 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC104332.2-201ENST00000429959 156 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC004865.1-201ENST00000442276 1003 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 RAB11AP1-201ENST00000442978 646 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXA9P31269 BX248409.1-201ENST00000455497 255 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 SNORD109B-201ENST00000458961 67 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 SNORD109A-201ENST00000459128 67 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA9P31269 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 RN7SL633P-201ENST00000488974 297 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA9P31269 IGJP1-201ENST00000522682 475 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.99□□□□□ -1.93
HOXA9P31269 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 AC124293.1-201ENST00000530034 493 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.99□□□□□ -1.93
HOXA9P31269 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.99□□□□□ -1.93
HOXA9P31269 AC004217.3-201ENST00000551552 878 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXA9P31269 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXA9P31269 AC010653.1-201ENST00000571108 881 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 MTCO1P40-201ENST00000574371 625 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 VN1R88P-201ENST00000596787 292 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AL020997.3-201ENST00000602843 359 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC018645.2-201ENST00000609151 472 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXA9P31269 AL356118.1-201ENST00000635272 1078 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
HOXA9P31269 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXA9P31269 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA9P31269 AC025263.3-201ENST00000622965 1396 ntBASIC2.99□□□□□ -1.93
HOXA9P31269 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms