Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL11A2P13942 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A2P13942 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A2P13942 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL11A2P13942 RNU6-216P-201ENST00000363282 104 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 RNU4-7P-201ENST00000364758 141 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 MIR1289-1-201ENST00000408836 144 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AC017079.2-201ENST00000416102 485 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.47□□□□□ -1.69
COL11A2P13942 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.47□□□□□ -1.69
COL11A2P13942 PIGFP2-201ENST00000421400 651 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A2P13942 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.47□□□□□ -1.69
COL11A2P13942 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A2P13942 RPS26P30-201ENST00000443431 335 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.47□□□□□ -1.69
COL11A2P13942 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A2P13942 AC104687.1-201ENST00000485829 412 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AC097462.2-201ENST00000504623 481 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 SNX5P1-201ENST00000505757 1041 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A2P13942 RPL23AP94-201ENST00000512518 302 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A2P13942 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.47□□□□□ -1.69
COL11A2P13942 AC087276.1-201ENST00000529659 480 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.47□□□□□ -1.69
COL11A2P13942 AC138915.2-201ENST00000569776 97 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AL009028.1-201ENST00000604895 802 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AC131902.3-201ENST00000611767 581 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 MIR6852-201ENST00000621699 66 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A2P13942 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL11A2P13942 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
COL11A2P13942 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A2P13942 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.47□□□□□ -1.69
COL11A2P13942 OR5BR1P-201ENST00000524992 1330 ntBASIC4.47□□□□□ -1.69
COL11A2P13942 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL11A2P13942 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL11A2P13942 Y_RNA.89-201ENST00000363031 102 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
COL11A2P13942 NPM1P38-201ENST00000403835 865 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A2P13942 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.46□□□□□ -1.69
COL11A2P13942 SDCBPP3-201ENST00000419629 891 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 BX890604.2-201ENST00000427883 474 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC236972.1-201ENST00000433225 199 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A2P13942 AL022238.1-201ENST00000442557 355 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 MTND6P5-201ENST00000448266 512 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.46□□□□□ -1.69
COL11A2P13942 BX248409.1-201ENST00000455497 255 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 RPS29P25-201ENST00000481709 171 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC091544.1-201ENST00000484702 348 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 UBA52P3-201ENST00000491303 382 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC006445.1-201ENST00000491925 405 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
COL11A2P13942 RNA5SP216-201ENST00000516111 123 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.46□□□□□ -1.69
COL11A2P13942 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.46□□□□□ -1.69
COL11A2P13942 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A2P13942 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.46□□□□□ -1.69
COL11A2P13942 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A2P13942 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.46□□□□□ -1.69
COL11A2P13942 MIR4637-201ENST00000582405 84 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.69
COL11A2P13942 AL139286.1-201ENST00000604465 483 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC069304.2-201ENST00000605154 435 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 AC009159.1-201ENST00000618386 642 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.46□□□□□ -1.69
COL11A2P13942 AC093591.3-201ENST00000634516 308 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 ATE1-AS1-202ENST00000636460 506 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 MIR3662-201ENST00000637030 95 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 MIR1321-201ENST00000637766 79 ntBASIC4.46□□□□□ -1.69
COL11A2P13942 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL11A2P13942 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
COL11A2P13942 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A2P13942 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A2P13942 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 AC083843.3-201ENST00000623679 2186 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL11A2P13942 RNU6-433P-201ENST00000363216 104 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 RNU5D-1-201ENST00000363299 116 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 RNU6-1090P-201ENST00000364065 94 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 RNU6-185P-201ENST00000384421 107 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 Y_RNA.573-201ENST00000384763 105 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 RPL31P1-201ENST00000398116 372 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 GSTA9P-201ENST00000406231 611 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.46□□□□□ -1.7
COL11A2P13942 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.46□□□□□ -1.7
COL11A2P13942 ZNF90P2-204ENST00000419323 1075 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.46□□□□□ -1.7
COL11A2P13942 ELOCP14-201ENST00000428070 331 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 FCF1P1-201ENST00000432690 571 ntBASIC4.46□□□□□ -1.7
COL11A2P13942 HLA-N-201ENST00000437516 135 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms