Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD8P13378 AC091153.1-201ENST00000466297 402 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 TBCAP3-201ENST00000512475 312 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 RNU1-54P-201ENST00000517181 120 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXD8P13378 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD8P13378 OR11H5P-201ENST00000554039 926 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 AL133153.1-201ENST00000557756 303 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 AL354984.3-201ENST00000604803 325 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
HOXD8P13378 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD8P13378 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD8P13378 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXD8P13378 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 MTND5P30-201ENST00000452896 1731 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXD8P13378 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD8P13378 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HOXD8P13378 RNVU1-3-201ENST00000364313 161 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RNA5SP223-201ENST00000365174 120 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RNY1P14-201ENST00000384426 108 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 Y_RNA.556-201ENST00000384677 113 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXD8P13378 RNA5SP241-201ENST00000391326 114 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AL049697.2-201ENST00000403708 294 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RPL30P2-201ENST00000414021 291 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 AL354766.1-201ENST00000423396 542 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 MED28P3-201ENST00000444288 531 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 TPT1P13-201ENST00000449760 499 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 SCARNA18-201ENST00000459004 134 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 RN7SL738P-201ENST00000470264 297 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 CR383656.1-201ENST00000484916 377 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD8P13378 AC026782.1-201ENST00000512952 449 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC104136.1-201ENST00000512969 394 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RNA5SP392-201ENST00000516905 112 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 Y_RNA.708-201ENST00000516950 96 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RNU6-388P-201ENST00000517012 105 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RNU6-389P-201ENST00000517048 105 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC012339.2-201ENST00000523996 453 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 RANP3-201ENST00000530970 276 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD8P13378 NF1P5-201ENST00000588287 448 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC020910.3-201ENST00000603701 874 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 ATP1B3P1-201ENST00000605365 821 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC009229.3-201ENST00000608056 282 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC098657.3-201ENST00000620434 263 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AP000346.3-201ENST00000622821 210 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC243312.2-201ENST00000623340 601 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 CR381572.2-201ENST00000624852 397 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD8P13378 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 AC093671.1-201ENST00000624981 2929 ntBASIC5.59□□□□□ -1.51
HOXD8P13378 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD8P13378 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXD8P13378 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.59□□□□□ -1.52
HOXD8P13378 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
HOXD8P13378 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD8P13378 ZNF33CP-201ENST00000432492 2030 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD8P13378 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD8P13378 RNU6-1243P-201ENST00000364028 107 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 RNU6-1078P-201ENST00000364522 103 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 RNU6-61P-201ENST00000365528 109 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 Y_RNA.389-201ENST00000383924 113 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 SNORA70.6-201ENST00000383934 134 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 RNU6-398P-201ENST00000384143 109 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 ADAM24P-201ENST00000398655 2101 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXD8P13378 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 MRPS21P2-201ENST00000424704 264 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AC073264.2-201ENST00000448886 166 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD8P13378 GSTA11P-201ENST00000452866 669 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 RPL36AP13-201ENST00000457490 317 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 snoU13.7-201ENST00000459220 104 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AC104564.1-201ENST00000493028 407 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 COX7A2P2-201ENST00000505291 250 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms