Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RNU6-1097P-201ENST00000363586 107 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 SNORD113.2-201ENST00000364166 89 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 OR1L6-202ENST00000373684 1044 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 MIR1193-201ENST00000408109 78 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RNU4-25P-201ENST00000410569 230 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RNU4-61P-201ENST00000411243 107 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 UQCRBP1-201ENST00000421129 336 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AC137499.1-201ENST00000427602 88 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AC004975.1-201ENST00000428733 208 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 MTND3P16-201ENST00000452205 344 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 MTND1P9-201ENST00000453775 944 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.635-201ENST00000459041 101 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RN7SL197P-201ENST00000466981 299 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 COX7A2P2-201ENST00000505291 250 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AC093840.1-201ENST00000511599 336 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 APOOP3-201ENST00000536787 586 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AL110118.1-201ENST00000553543 400 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 MIR1254-2-201ENST00000579553 63 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 MIR4680-201ENST00000580906 66 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RNU6-89P-201ENST00000606519 100 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 OR6R2P-201ENST00000609216 300 ntBASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CSB-PGBD3P0DP91 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC005332.5-201ENST00000591222 2919 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.148-201ENST00000363557 117 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 RNU6-702P-201ENST00000364982 107 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.339-201ENST00000365325 102 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 SNORA63.7-201ENST00000365579 123 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 U3.29-201ENST00000391296 212 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 ELOCP19-201ENST00000411919 318 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 RGS17P1-201ENST00000423358 553 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 RPEP3-201ENST00000425462 676 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 EZH2P1-201ENST00000431167 291 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AL450023.3-201ENST00000440592 271 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AL353691.1-201ENST00000451332 387 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AL691482.1-201ENST00000453255 87 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 BTF3P15-201ENST00000455606 336 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 SNRPCP3-201ENST00000474888 476 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 RN7SL41P-201ENST00000476144 297 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AL163973.1-201ENST00000484753 577 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 RN7SL441P-201ENST00000492388 296 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 TMEM248P1-201ENST00000510579 951 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC021146.1-201ENST00000511202 716 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC010424.2-201ENST00000607594 443 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC068724.3-201ENST00000625906 87 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 AC000095.2-202ENST00000637415 154 ntBASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.48□□□□□ -1.37
CSB-PGBD3P0DP91 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 ZNF734P-201ENST00000419494 1534 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 Y_RNA.301-201ENST00000364990 103 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 RNU2-3P-201ENST00000410144 191 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC099670.2-201ENST00000435130 321 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 MED28P3-201ENST00000444288 531 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 NUTF2P7-201ENST00000453086 375 ntBASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.47□□□□□ -1.37
CSB-PGBD3P0DP91 MTCO3P44-201ENST00000510977 541 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms