Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC090616.5-202ENST00000582111 297 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 BDH2P1-201ENST00000602288 736 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AP001521.1-201ENST00000609150 300 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 MIR6864-201ENST00000617935 70 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 NSRP1P1-201ENST00000444067 1693 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 RNU1-138P-201ENST00000384093 164 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.02□□□□□ -2.09
FREM3P0C091 Z77249.1-201ENST00000444622 1175 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AC004263.1-201ENST00000479327 332 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.02□□□□□ -2.09
FREM3P0C091 MTND5P4-201ENST00000514978 288 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 OR5BN1P-201ENST00000532955 829 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.02□□□□□ -2.09
FREM3P0C091 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FREM3P0C091 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
FREM3P0C091 MIR4474-201ENST00000579189 78 ntBASIC2.02□□□□□ -2.09
FREM3P0C091 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
FREM3P0C091 RNU6-185P-201ENST00000384421 107 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.01□□□□□ -2.09
FREM3P0C091 ARPC3P2-201ENST00000457786 533 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 RPL7P5-201ENST00000471472 736 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.01□□□□□ -2.09
FREM3P0C091 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.01□□□□□ -2.09
FREM3P0C091 AC067904.2-201ENST00000517322 1283 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.01□□□□□ -2.09
FREM3P0C091 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.01□□□□□ -2.09
FREM3P0C091 ZNF92P3-201ENST00000596594 954 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 RPL23AP78-201ENST00000599928 470 ntBASIC2.01□□□□□ -2.09
FREM3P0C091 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.01□□□□□ -2.09
FREM3P0C091 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.01□□□□□ -2.09
FREM3P0C091 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
FREM3P0C091 OR5H15-201ENST00000383696 930 ntBASIC2□□□□□ -2.09
FREM3P0C091 RNU1-73P-201ENST00000383971 164 ntBASIC2□□□□□ -2.09
FREM3P0C091 AL024474.1-201ENST00000404655 591 ntBASIC2□□□□□ -2.09
FREM3P0C091 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2□□□□□ -2.09
FREM3P0C091 ATP5F1P1-201ENST00000433775 569 ntBASIC2□□□□□ -2.09
FREM3P0C091 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2□□□□□ -2.09
FREM3P0C091 HIGD1AP2-201ENST00000446367 280 ntBASIC2□□□□□ -2.09
FREM3P0C091 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 CCNHP1-201ENST00000513311 678 ntBASIC2□□□□□ -2.09
FREM3P0C091 RNA5SP281-201ENST00000516504 135 ntBASIC2□□□□□ -2.09
FREM3P0C091 AC104986.1-201ENST00000517978 436 ntBASIC2□□□□□ -2.09
FREM3P0C091 MTCYBP41-201ENST00000528913 1123 ntBASIC2□□□□□ -2.09
FREM3P0C091 AP000889.2-201ENST00000532684 490 ntBASIC2□□□□□ -2.09
FREM3P0C091 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 MIR5007-201ENST00000583098 95 ntBASIC2□□□□□ -2.09
FREM3P0C091 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
FREM3P0C091 AC005021.1-201ENST00000608730 355 ntBASIC2□□□□□ -2.09
FREM3P0C091 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2□□□□□ -2.09
FREM3P0C091 ZNF271P-202ENST00000465539 1970 ntBASIC2□□□□□ -2.09
FREM3P0C091 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
FREM3P0C091 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
FREM3P0C091 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
FREM3P0C091 METTL21EP-201ENST00000298105 713 ntBASIC2□□□□□ -2.09
FREM3P0C091 RNU6-386P-201ENST00000362650 107 ntBASIC2□□□□□ -2.09
FREM3P0C091 Z98742.3-201ENST00000418637 326 ntBASIC2□□□□□ -2.09
FREM3P0C091 AC023128.2-201ENST00000420880 1223 ntBASIC2□□□□□ -2.09
FREM3P0C091 HSPE1P28-201ENST00000443139 211 ntBASIC2□□□□□ -2.09
FREM3P0C091 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 HMGB1P15-201ENST00000453854 435 ntBASIC2□□□□□ -2.09
FREM3P0C091 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 MTCYBP20-201ENST00000524239 1129 ntBASIC2□□□□□ -2.09
FREM3P0C091 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2□□□□□ -2.09
FREM3P0C091 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2□□□□□ -2.09
FREM3P0C091 AC103710.2-201ENST00000609912 942 ntBASIC2□□□□□ -2.09
FREM3P0C091 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
FREM3P0C091 AC008432.1-201ENST00000615912 1320 ntBASIC2□□□□□ -2.09
FREM3P0C091 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
FREM3P0C091 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
FREM3P0C091 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.99□□□□□ -2.09
FREM3P0C091 RNU6-600P-201ENST00000362524 99 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 RNA5SP456-201ENST00000364002 114 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 RNU6-335P-201ENST00000364563 113 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 RNU1-91P-201ENST00000364746 163 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 RPL7P10-201ENST00000417407 739 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 MTCYBP24-201ENST00000420387 1106 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 TRIM60P18-201ENST00000441518 828 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 AC093392.2-201ENST00000450682 337 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 HMGN1P8-201ENST00000463578 288 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.99□□□□□ -2.09
FREM3P0C091 AC098799.2-201ENST00000509466 868 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 MTCO2P32-201ENST00000514865 403 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.99□□□□□ -2.09
FREM3P0C091 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
FREM3P0C091 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.99□□□□□ -2.09
FREM3P0C091 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.99□□□□□ -2.09
FREM3P0C091 AC092650.2-201ENST00000619984 902 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.99□□□□□ -2.09
FREM3P0C091 AP002907.1-201ENST00000606361 1430 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
FREM3P0C091 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
FREM3P0C091 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
FREM3P0C091 RNU4-31P-201ENST00000384211 141 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 RNU2-21P-201ENST00000410368 188 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 HMGN2P35-201ENST00000412164 270 ntBASIC1.99□□□□□ -2.09
FREM3P0C091 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.99□□□□□ -2.09
FREM3P0C091 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms