Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC097462.2-201ENST00000504623 481 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.99□□□□□ -1.93
HOXC4P09017 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 AC104057.1-201ENST00000515547 497 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 RN7SKP272-201ENST00000516988 232 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 HIGD1AP6-201ENST00000521833 279 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AP004371.1-201ENST00000525240 214 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 UBTFL10-201ENST00000528532 562 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC4P09017 AC010198.2-201ENST00000550612 259 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AL163153.1-201ENST00000554223 283 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 AC022069.1-201ENST00000582910 658 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 AC011468.4-201ENST00000603942 409 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 AC093783.1-201ENST00000612976 329 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HOXC4P09017 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC4P09017 ZNF807-201ENST00000328088 1707 ntBASIC2.99□□□□□ -1.93
HOXC4P09017 ZNF734P-201ENST00000419494 1534 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC4P09017 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC093010.3-201ENST00000570269 15214 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC4P09017 MTND5P24-201ENST00000438892 1767 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC073325.2-201ENST00000339545 159 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 RNU4-40P-201ENST00000364351 143 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 RNU6-1181P-201ENST00000384191 106 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 MIR634-201ENST00000385208 97 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC4P09017 RNU2-71P-201ENST00000411395 189 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC4P09017 AC246680.2-201ENST00000422106 389 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 C1DP1-201ENST00000426049 402 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXC4P09017 AC010881.1-201ENST00000433830 235 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 VDAC1P3-201ENST00000434069 851 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC107083.1-201ENST00000439643 279 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 HSFY3P-201ENST00000444242 1191 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC4P09017 AL034418.1-201ENST00000448675 860 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 OR51B8P-201ENST00000449892 769 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 ZNF886P-201ENST00000450781 723 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC4P09017 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC4P09017 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 RPS15AP1-201ENST00000457423 391 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 snoU13.3-201ENST00000459441 104 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC117440.1-201ENST00000474107 571 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC080014.1-201ENST00000496877 1201 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC083906.5-201ENST00000503722 328 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.98□□□□□ -1.93
HOXC4P09017 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC4P09017 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.98□□□□□ -1.93
HOXC4P09017 SNORA64.4-201ENST00000516632 81 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC009812.2-201ENST00000517657 457 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC4P09017 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.98□□□□□ -1.93
HOXC4P09017 MTATP6P15-201ENST00000527233 835 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 NDUFS5P6-201ENST00000529136 295 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AP003385.6-201ENST00000531603 374 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC006518.2-201ENST00000542513 940 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC4P09017 AC011611.5-201ENST00000552477 578 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AL132657.2-201ENST00000564417 358 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC012182.1-201ENST00000570133 895 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC005951.1-201ENST00000576706 485 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.98□□□□□ -1.93
HOXC4P09017 MTND3P19-201ENST00000603825 345 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC002487.1-201ENST00000604565 994 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 BNIP3P4-201ENST00000604946 565 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC092106.3-201ENST00000611308 722 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC021755.4-201ENST00000616620 456 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC4P09017 BX649567.1-201ENST00000642071 1134 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC4P09017 AC025263.3-201ENST00000622965 1396 ntBASIC2.98□□□□□ -1.93
HOXC4P09017 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
HOXC4P09017 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC4P09017 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXC4P09017 AC004972.1-201ENST00000623934 2209 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXC4P09017 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HOXC4P09017 AC099786.3-201ENST00000565735 1410 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXC4P09017 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXC4P09017 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXC4P09017 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXC4P09017 SNORD116-12-201ENST00000384468 92 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 RN7SKP123-201ENST00000410732 291 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 RPL22P18-201ENST00000417197 377 ntBASIC2.97□□□□□ -1.93
HOXC4P09017 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC4P09017 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms