Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
MMP2P08253 AC006378.2-201ENST00000623178 2476 ntBASIC3.82□□□□□ -1.8
MMP2P08253 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.82□□□□□ -1.8
MMP2P08253 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP2P08253 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 GABPAP-201ENST00000419271 1356 ntBASIC3.81□□□□□ -1.8
MMP2P08253 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP2P08253 RNU4-24P-201ENST00000364565 139 ntBASIC3.81□□□□□ -1.8
MMP2P08253 RNU6-769P-201ENST00000384407 104 ntBASIC3.81□□□□□ -1.8
MMP2P08253 RNU6-821P-201ENST00000390995 107 ntBASIC3.81□□□□□ -1.8
MMP2P08253 SNORA57.1-201ENST00000391227 145 ntBASIC3.81□□□□□ -1.8
MMP2P08253 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
MMP2P08253 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP2P08253 RPL17P12-201ENST00000413391 526 ntBASIC3.81□□□□□ -1.8
MMP2P08253 RPL36AP36-201ENST00000418616 301 ntBASIC3.81□□□□□ -1.8
MMP2P08253 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP2P08253 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.81□□□□□ -1.8
MMP2P08253 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.81□□□□□ -1.8
MMP2P08253 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
MMP2P08253 MTCO2P18-201ENST00000457151 658 ntBASIC3.81□□□□□ -1.8
MMP2P08253 RNU6-956P-201ENST00000458868 103 ntBASIC3.81□□□□□ -1.8
MMP2P08253 RPL9P32-201ENST00000464118 620 ntBASIC3.81□□□□□ -1.8
MMP2P08253 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MMP2P08253 AP000797.1-201ENST00000478870 387 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AL139099.1-201ENST00000497398 403 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AC004069.2-201ENST00000505438 1114 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AC091435.1-201ENST00000505442 584 ntBASIC3.81□□□□□ -1.8
MMP2P08253 NPM1P41-201ENST00000512920 831 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 MTCYBP41-201ENST00000528913 1123 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.81□□□□□ -1.8
MMP2P08253 AC006362.1-201ENST00000567392 174 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AC090615.1-201ENST00000577519 154 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 MIR5685-201ENST00000579080 79 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.81□□□□□ -1.8
MMP2P08253 MIR4307-201ENST00000582802 84 ntBASIC3.81□□□□□ -1.8
MMP2P08253 MIR548AB-201ENST00000584917 84 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AL353997.4-201ENST00000586196 166 ntBASIC3.81□□□□□ -1.8
MMP2P08253 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 AC064872.1-201ENST00000604823 1072 ntBASIC3.81□□□□□ -1.8
MMP2P08253 BCRP9-201ENST00000605312 388 ntBASIC3.81□□□□□ -1.8
MMP2P08253 BRDTP1-201ENST00000605735 677 ntBASIC3.81□□□□□ -1.8
MMP2P08253 MIR486-1-201ENST00000612171 68 ntBASIC3.81□□□□□ -1.8
MMP2P08253 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP2P08253 AL596245.1-201ENST00000618994 362 ntBASIC3.81□□□□□ -1.8
MMP2P08253 AC091905.1-201ENST00000624400 311 ntBASIC3.81□□□□□ -1.8
MMP2P08253 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP2P08253 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP2P08253 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP2P08253 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP2P08253 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP2P08253 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP2P08253 AC024560.2-201ENST00000507981 1497 ntBASIC3.8□□□□□ -1.8
MMP2P08253 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP2P08253 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
MMP2P08253 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP2P08253 SNORA51.2-201ENST00000364595 132 ntBASIC3.8□□□□□ -1.8
MMP2P08253 Y_RNA.553-201ENST00000384670 102 ntBASIC3.8□□□□□ -1.8
MMP2P08253 U8.11-201ENST00000384699 133 ntBASIC3.8□□□□□ -1.8
MMP2P08253 U8.12-201ENST00000384701 133 ntBASIC3.8□□□□□ -1.8
MMP2P08253 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MMP2P08253 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MMP2P08253 AL356421.1-201ENST00000403255 413 ntBASIC3.8□□□□□ -1.8
MMP2P08253 AL513174.1-201ENST00000423182 629 ntBASIC3.8□□□□□ -1.8
MMP2P08253 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP2P08253 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
MMP2P08253 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP2P08253 GDI2P2-201ENST00000445131 608 ntBASIC3.8□□□□□ -1.8
MMP2P08253 NANOGP10-201ENST00000453325 895 ntBASIC3.8□□□□□ -1.8
MMP2P08253 AL445669.2-201ENST00000454425 421 ntBASIC3.8□□□□□ -1.8
MMP2P08253 U8.18-201ENST00000459285 133 ntBASIC3.8□□□□□ -1.8
MMP2P08253 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP2P08253 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP2P08253 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP2P08253 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP2P08253 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP2P08253 COX7A2P2-201ENST00000505291 250 ntBASIC3.8□□□□□ -1.8
MMP2P08253 AC006390.1-201ENST00000508068 283 ntBASIC3.8□□□□□ -1.8
MMP2P08253 TXNP6-201ENST00000510190 310 ntBASIC3.8□□□□□ -1.8
MMP2P08253 NDUFB4P9-201ENST00000511646 388 ntBASIC3.8□□□□□ -1.8
MMP2P08253 RNA5SP164-201ENST00000516533 110 ntBASIC3.8□□□□□ -1.8
MMP2P08253 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.8□□□□□ -1.8
MMP2P08253 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP2P08253 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP2P08253 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP2P08253 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.8□□□□□ -1.8
MMP2P08253 ZNF192P1-203ENST00000565888 810 ntBASIC3.8□□□□□ -1.8
MMP2P08253 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP2P08253 AC103987.3-201ENST00000582071 292 ntBASIC3.8□□□□□ -1.8
MMP2P08253 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP2P08253 AL451064.1-201ENST00000607718 471 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms