Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC134050.1-201ENST00000495088 933 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 KLHL2P1-201ENST00000508691 521 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC113347.3-201ENST00000509113 148 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFBP01127 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
PDGFBP01127 SNRPGP16-201ENST00000533275 226 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 AL163153.1-201ENST00000554223 283 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFBP01127 AC067852.3-201ENST00000589177 561 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC021749.1-201ENST00000604322 607 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC128687.2-201ENST00000609657 566 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AL110115.1-201ENST00000614396 364 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AL121895.2-201ENST00000619558 447 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 AC091925.2-201ENST00000625059 256 ntBASIC3.44□□□□□ -1.86
PDGFBP01127 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
PDGFBP01127 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFBP01127 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFBP01127 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.43□□□□□ -1.86
PDGFBP01127 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFBP01127 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFBP01127 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 IPO8P1-201ENST00000455509 3109 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PDGFBP01127 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 Y_RNA.25-201ENST00000362528 102 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RNU4-51P-201ENST00000364206 140 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RNU6-173P-201ENST00000364215 104 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RNU6-657P-201ENST00000383904 107 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RNU6-636P-201ENST00000384598 107 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AL136310.1-201ENST00000404926 654 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AL592310.1-201ENST00000414330 671 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFBP01127 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFBP01127 ARF4P2-201ENST00000430209 526 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.43□□□□□ -1.86
PDGFBP01127 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFBP01127 AC096638.2-201ENST00000434965 711 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RPL23AP76-201ENST00000441860 458 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 VN1R10P-201ENST00000447106 875 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 HMGB3P22-202ENST00000451823 572 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AL136097.1-201ENST00000456945 913 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC087312.1-201ENST00000471411 480 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC091951.3-201ENST00000504093 246 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFBP01127 AC109458.1-201ENST00000508858 316 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC026412.2-201ENST00000512270 1075 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RNA5SP356-201ENST00000515972 94 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 SNORA31.8-201ENST00000516327 108 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC103783.1-201ENST00000520506 373 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFBP01127 AC138915.2-201ENST00000569776 97 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 MIR3912-201ENST00000577566 105 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.43□□□□□ -1.86
PDGFBP01127 AL391001.1-201ENST00000602747 715 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 AL109653.1-201ENST00000603091 248 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 MKKS-204ENST00000639674 192 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
PDGFBP01127 AC005183.1-201ENST00000603687 1979 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.43□□□□□ -1.86
PDGFBP01127 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFBP01127 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFBP01127 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFBP01127 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFBP01127 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFBP01127 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 SNORD116.1-201ENST00000365628 92 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PDGFBP01127 RNU6-413P-201ENST00000384115 107 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 RNU1-89P-201ENST00000384592 164 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 RN7SKP111-201ENST00000410349 271 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 Z75741.2-201ENST00000417272 1167 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 MTCO2P17-201ENST00000424336 677 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 NEK4P1-201ENST00000433383 879 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFBP01127 SNRPEP4-201ENST00000435815 279 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFBP01127 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFBP01127 MTCYBP11-201ENST00000447254 1109 ntBASIC3.42□□□□□ -1.86
PDGFBP01127 AC098824.1-201ENST00000453565 980 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms