Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
GGPS1O95749 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GGPS1O95749 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GGPS1O95749 SNORA48.2-201ENST00000390926 124 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 MIR1284-201ENST00000408337 120 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 HMGN1P24-201ENST00000412282 298 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 TPMTP2-201ENST00000414372 726 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC063979.1-201ENST00000415539 377 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.78□□□□□ -1.8
GGPS1O95749 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.78□□□□□ -1.8
GGPS1O95749 MTCO2P20-201ENST00000437339 673 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 MUPP-201ENST00000438111 566 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.78□□□□□ -1.8
GGPS1O95749 AL357552.1-201ENST00000445254 415 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 MRPS31P2-201ENST00000451581 518 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC006539.3-201ENST00000454258 129 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 MTCO3P11-201ENST00000455103 774 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 CFTRP1-201ENST00000456646 183 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.78□□□□□ -1.8
GGPS1O95749 AC023424.2-201ENST00000493479 777 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 RN7SL504P-201ENST00000494496 287 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC020893.1-201ENST00000502452 580 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC112198.1-201ENST00000505369 1220 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.78□□□□□ -1.8
GGPS1O95749 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GGPS1O95749 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.78□□□□□ -1.8
GGPS1O95749 AC010587.2-201ENST00000511727 448 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 APOOP4-201ENST00000513530 597 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.78□□□□□ -1.8
GGPS1O95749 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
GGPS1O95749 DEFB131D-201ENST00000526803 184 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC005476.1-201ENST00000554427 397 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 MTND4P33-201ENST00000556706 766 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.78□□□□□ -1.8
GGPS1O95749 AC091057.2-201ENST00000602594 792 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC004987.4-201ENST00000603383 338 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC068787.1-201ENST00000623908 691 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AC231657.1-201ENST00000624313 397 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GGPS1O95749 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GGPS1O95749 OR4G11P-202ENST00000642116 1414 ntBASIC3.78□□□□□ -1.8
GGPS1O95749 AP000776.1-201ENST00000530032 1663 ntBASIC3.78□□□□□ -1.81
GGPS1O95749 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
GGPS1O95749 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GGPS1O95749 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.77□□□□□ -1.81
GGPS1O95749 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 RNU6-1155P-201ENST00000363554 107 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
GGPS1O95749 AL357075.1-201ENST00000404107 726 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 RNU6-55P-201ENST00000411092 107 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 RNU6-954P-201ENST00000411355 107 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 MTCO2P5-201ENST00000422621 426 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 AC079780.1-201ENST00000428259 207 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AL512649.1-201ENST00000428997 581 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 CR769776.1-201ENST00000441254 787 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.77□□□□□ -1.81
GGPS1O95749 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.77□□□□□ -1.81
GGPS1O95749 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 RNU7-136P-201ENST00000458819 69 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GGPS1O95749 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.77□□□□□ -1.81
GGPS1O95749 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.77□□□□□ -1.81
GGPS1O95749 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.77□□□□□ -1.81
GGPS1O95749 MTCO2P32-201ENST00000514865 403 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.77□□□□□ -1.81
GGPS1O95749 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 SYF2P1-201ENST00000550658 413 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 CYCSP2-201ENST00000558168 301 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.77□□□□□ -1.81
GGPS1O95749 AC007349.4-201ENST00000608114 532 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AP000240.1-201ENST00000609910 452 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC245297.2-201ENST00000610119 565 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC097478.2-201ENST00000610572 514 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 AC110801.1-201ENST00000623590 212 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.77□□□□□ -1.81
GGPS1O95749 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.77□□□□□ -1.81
GGPS1O95749 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
GGPS1O95749 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GGPS1O95749 ZNF833P-201ENST00000424938 1494 ntBASIC3.77□□□□□ -1.81
GGPS1O95749 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.77□□□□□ -1.81
GGPS1O95749 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GGPS1O95749 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GGPS1O95749 DEFB109C-201ENST00000382575 264 ntBASIC3.76□□□□□ -1.81
GGPS1O95749 DEFB109B-201ENST00000382656 264 ntBASIC3.76□□□□□ -1.81
GGPS1O95749 MIR128-1-201ENST00000384921 82 ntBASIC3.76□□□□□ -1.81
GGPS1O95749 ANAPC10P1-201ENST00000395991 556 ntBASIC3.76□□□□□ -1.81
GGPS1O95749 AL031679.1-201ENST00000400616 525 ntBASIC3.76□□□□□ -1.81
GGPS1O95749 RNA5SP129-201ENST00000410276 118 ntBASIC3.76□□□□□ -1.81
GGPS1O95749 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms