Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.97□□□□□ -1.93
POLR1AO95602 RNU6-717P-201ENST00000459076 104 ntBASIC2.97□□□□□ -1.93
POLR1AO95602 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.97□□□□□ -1.93
POLR1AO95602 AC091953.2-201ENST00000623979 160 ntBASIC2.97□□□□□ -1.93
POLR1AO95602 AC048347.1-201ENST00000624621 427 ntBASIC2.97□□□□□ -1.93
POLR1AO95602 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.97□□□□□ -1.93
POLR1AO95602 AL139276.1-201ENST00000311910 1001 ntBASIC2.96□□□□□ -1.93
POLR1AO95602 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
POLR1AO95602 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.96□□□□□ -1.93
POLR1AO95602 HMGN1P28-201ENST00000521340 364 ntBASIC2.96□□□□□ -1.93
POLR1AO95602 AP000553.5-201ENST00000641933 54 ntBASIC2.96□□□□□ -1.93
POLR1AO95602 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.96□□□□□ -1.94
POLR1AO95602 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
POLR1AO95602 AL445685.2-201ENST00000422551 342 ntBASIC2.96□□□□□ -1.94
POLR1AO95602 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.96□□□□□ -1.94
POLR1AO95602 RPL23AP76-201ENST00000441860 458 ntBASIC2.96□□□□□ -1.94
POLR1AO95602 AC245517.4-201ENST00000448601 281 ntBASIC2.96□□□□□ -1.94
POLR1AO95602 AC017007.3-201ENST00000479865 435 ntBASIC2.96□□□□□ -1.94
POLR1AO95602 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.96□□□□□ -1.94
POLR1AO95602 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.96□□□□□ -1.94
POLR1AO95602 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.96□□□□□ -1.94
POLR1AO95602 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.95□□□□□ -1.94
POLR1AO95602 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.95□□□□□ -1.94
POLR1AO95602 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.95□□□□□ -1.94
POLR1AO95602 AC140059.1-201ENST00000489238 361 ntBASIC2.95□□□□□ -1.94
POLR1AO95602 AC090543.1-201ENST00000492168 485 ntBASIC2.95□□□□□ -1.94
POLR1AO95602 OR52A4P-203ENST00000498233 1014 ntBASIC2.95□□□□□ -1.94
POLR1AO95602 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.95□□□□□ -1.94
POLR1AO95602 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.95□□□□□ -1.94
POLR1AO95602 OR4T1P-201ENST00000554933 911 ntBASIC2.95□□□□□ -1.94
POLR1AO95602 SUB1P3-201ENST00000564581 315 ntBASIC2.95□□□□□ -1.94
POLR1AO95602 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.95□□□□□ -1.94
POLR1AO95602 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
POLR1AO95602 RNU6-661P-201ENST00000362409 107 ntBASIC2.94□□□□□ -1.94
POLR1AO95602 AP1B1P2-201ENST00000416196 106 ntBASIC2.94□□□□□ -1.94
POLR1AO95602 AC008173.1-201ENST00000418901 264 ntBASIC2.94□□□□□ -1.94
POLR1AO95602 AC090071.1-201ENST00000507713 644 ntBASIC2.94□□□□□ -1.94
POLR1AO95602 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1AO95602 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.94□□□□□ -1.94
POLR1AO95602 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.94□□□□□ -1.94
POLR1AO95602 MIR4448-201ENST00000584360 86 ntBASIC2.94□□□□□ -1.94
POLR1AO95602 AC008687.2-201ENST00000597865 520 ntBASIC2.94□□□□□ -1.94
POLR1AO95602 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.93□□□□□ -1.94
POLR1AO95602 RNA5SP190-201ENST00000365222 118 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 MIR9-3-201ENST00000385084 90 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 SNORA40.18-201ENST00000391200 128 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AC240504.1-201ENST00000395709 845 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1AO95602 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1AO95602 AL163540.1-201ENST00000485382 386 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AC068781.1-201ENST00000488231 618 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1AO95602 AP002967.1-201ENST00000624203 539 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AC010680.1-201ENST00000590024 3590 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AC005336.3-201ENST00000623833 2679 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 VTRNA1-1-201ENST00000363120 99 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1AO95602 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1AO95602 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.93□□□□□ -1.94
POLR1AO95602 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.93□□□□□ -1.94
POLR1AO95602 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AC091046.2-201ENST00000620775 665 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 AL589994.2-201ENST00000621124 579 ntBASIC2.93□□□□□ -1.94
POLR1AO95602 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1AO95602 AC005005.2-201ENST00000420779 380 ntBASIC2.92□□□□□ -1.94
POLR1AO95602 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
POLR1AO95602 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1AO95602 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1AO95602 AC026241.1-201ENST00000517873 2142 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 FAM35CP-201ENST00000554755 2470 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 RNA5SP37-201ENST00000365420 130 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 BTF3P4-201ENST00000418852 495 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1AO95602 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1AO95602 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1AO95602 AL645939.1-201ENST00000453429 797 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1AO95602 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR1AO95602 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 MIR4255-201ENST00000579351 72 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR1AO95602 AC120053.1-201ENST00000607706 736 ntBASIC2.91□□□□□ -1.94
POLR1AO95602 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.91□□□□□ -1.94
POLR1AO95602 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR1AO95602 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.91□□□□□ -1.94
POLR1AO95602 AL049779.4-201ENST00000604500 156 ntBASIC2.9□□□□□ -1.94
POLR1AO95602 AC131280.1-202ENST00000624067 4211 ntBASIC2.9□□□□□ -1.94
POLR1AO95602 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.9□□□□□ -1.95
POLR1AO95602 CKAP2P1-201ENST00000555477 2049 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 MTND4P35-201ENST00000604257 1375 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 RNA5SP138-201ENST00000365098 114 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 MTCO3P30-201ENST00000426425 670 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.9□□□□□ -1.95
POLR1AO95602 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.9□□□□□ -1.95
POLR1AO95602 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
POLR1AO95602 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.9□□□□□ -1.95
POLR1AO95602 MIR3683-201ENST00000580847 82 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 MIR4303-201ENST00000581299 66 ntBASIC2.9□□□□□ -1.95
POLR1AO95602 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms