Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN9O95484 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC012498.1-201ENST00000424037 437 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 PSMA6P3-201ENST00000428242 164 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AC005326.1-201ENST00000429197 123 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 PTGES3P1-201ENST00000439531 483 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLDN9O95484 AL645638.1-201ENST00000440519 361 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AL589880.1-201ENST00000448271 287 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 RFC5P1-201ENST00000454419 874 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN9O95484 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 CBX3P3-201ENST00000508108 532 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN9O95484 RN7SKP43-201ENST00000516173 320 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 RNU6-711P-201ENST00000517255 106 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN9O95484 MTND1P36-201ENST00000522384 936 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 NDUFS5P6-201ENST00000529136 295 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN9O95484 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN9O95484 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN9O95484 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN9O95484 MTCO3P24-201ENST00000572729 782 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 MIR5195-201ENST00000583555 115 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 UBL5P2-201ENST00000583788 219 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AC068620.3-201ENST00000602749 560 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AL035411.2-201ENST00000604022 421 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AC106900.2-201ENST00000604994 317 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AC124016.2-201ENST00000610058 665 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AL442067.2-201ENST00000614033 363 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 AP001002.2-201ENST00000625137 386 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 U6.101-201ENST00000637707 76 ntBASIC2.97□□□□□ -1.93
CLDN9O95484 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN9O95484 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.97□□□□□ -1.93
CLDN9O95484 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CLDN9O95484 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CLDN9O95484 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.96□□□□□ -1.93
CLDN9O95484 AL136520.1-201ENST00000600311 1322 ntBASIC2.96□□□□□ -1.93
CLDN9O95484 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
CLDN9O95484 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN9O95484 RPL23AP57-201ENST00000332361 466 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLDN9O95484 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN9O95484 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN9O95484 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLDN9O95484 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLDN9O95484 SNORD67-201ENST00000390833 111 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 Y_RNA.578-201ENST00000390903 88 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 RNU1-101P-201ENST00000391171 127 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN9O95484 AL079342.2-201ENST00000403367 482 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 LUZP4P1-201ENST00000415420 344 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 RPL21P32-201ENST00000419877 477 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AL353678.1-201ENST00000422735 741 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 DPPA2P1-201ENST00000428060 556 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 RPL23AP69-201ENST00000431134 458 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN9O95484 AC091862.1-201ENST00000438016 1100 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN9O95484 MTCYBP42-201ENST00000444653 1130 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC016696.1-201ENST00000446949 318 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC112492.1-201ENST00000449607 712 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 Z82190.1-201ENST00000454534 490 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC091179.1-201ENST00000461606 579 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 RPL32P34-201ENST00000486380 400 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN9O95484 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN9O95484 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.96□□□□□ -1.94
CLDN9O95484 AC024224.1-201ENST00000538284 609 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.96□□□□□ -1.94
CLDN9O95484 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN9O95484 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN9O95484 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN9O95484 AC104072.1-201ENST00000568817 668 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 RPL23AP92-201ENST00000603609 255 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AP002802.2-201ENST00000605877 235 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC002076.2-201ENST00000617362 122 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC006249.1-201ENST00000621223 471 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 AC007275.1-201ENST00000621243 671 ntBASIC2.96□□□□□ -1.94
CLDN9O95484 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN9O95484 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.96□□□□□ -1.94
CLDN9O95484 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN9O95484 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CLDN9O95484 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN9O95484 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN9O95484 ANKRD36P1-201ENST00000344424 659 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 RNU6-173P-201ENST00000364215 104 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 RNA5SP267-201ENST00000364893 126 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN9O95484 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN9O95484 SNRPEP2-201ENST00000397592 279 ntBASIC2.95□□□□□ -1.94
CLDN9O95484 AL354719.1-201ENST00000406535 843 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms