Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 RPS4XP6-201ENST00000477670 797 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 MTCO3P35-201ENST00000485582 781 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC093801.2-201ENST00000503966 1050 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 ATP5F1P7-201ENST00000567330 760 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC104072.1-201ENST00000568817 668 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 MTCO3P24-201ENST00000572729 782 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC011471.1-201ENST00000585766 187 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 OR2AS2P-201ENST00000606902 342 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AL133445.2-201ENST00000611191 527 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AL590396.2-201ENST00000636511 1041 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTDNEP1O95476 ZNF849P-201ENST00000594711 1566 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CTDNEP1O95476 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTDNEP1O95476 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 AC073055.1-201ENST00000456901 1621 ntBASIC2.9□□□□□ -1.95
CTDNEP1O95476 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AP001350.1-201ENST00000601906 1524 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AL355143.1-201ENST00000407101 841 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC013262.1-201ENST00000426710 252 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC005002.1-201ENST00000447458 540 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 RPL23AP15-201ENST00000450202 459 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 NECAP1P2-201ENST00000455668 727 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC016065.2-201ENST00000514530 444 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 DNAJC19P3-201ENST00000594491 331 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 BNIP3P31-201ENST00000604515 566 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CTDNEP1O95476 AC093010.3-201ENST00000570269 15214 ntBASIC2.89□□□□□ -1.95
CTDNEP1O95476 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 AL672167.1-206ENST00000356293 943 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 RNU6-932P-201ENST00000391108 106 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AL162578.1-201ENST00000406202 378 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 HSPE1P1-201ENST00000421494 318 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 RPS7P2-201ENST00000435134 607 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 RNU7-140P-201ENST00000459546 60 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 KC877373.1-201ENST00000479066 408 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 RN7SKP24-201ENST00000515888 284 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 RN7SKP282-201ENST00000516824 299 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 RNU6-1073P-201ENST00000517182 106 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC095057.3-201ENST00000567102 1157 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC023824.3-201ENST00000569003 562 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC034268.2-201ENST00000571784 482 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC068620.3-201ENST00000602749 560 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AP000787.2-201ENST00000604432 568 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 BNIP3P4-201ENST00000604946 565 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTDNEP1O95476 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.88□□□□□ -1.95
CTDNEP1O95476 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC008759.3-201ENST00000613300 508 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC018926.1-201ENST00000616335 435 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 AC007275.1-201ENST00000621243 671 ntBASIC2.88□□□□□ -1.95
CTDNEP1O95476 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTDNEP1O95476 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CTDNEP1O95476 ZNF37BP-203ENST00000452306 1352 ntBASIC2.87□□□□□ -1.95
CTDNEP1O95476 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTDNEP1O95476 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
CTDNEP1O95476 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms