Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 Y_RNA.274-201ENST00000364714 101 ntBASIC0.92□□□□□ -2.26
USH2AO75445 RNU1-100P-201ENST00000365255 165 ntBASIC0.92□□□□□ -2.26
USH2AO75445 RPS29P1-201ENST00000465274 159 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 OR4G1P-201ENST00000588632 938 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AC008687.2-201ENST00000597865 520 ntBASIC0.92□□□□□ -2.26
USH2AO75445 MIR8081-201ENST00000611533 95 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 Z82195.2-201ENST00000612348 18351 ntBASIC0.92□□□□□ -2.26
USH2AO75445 ZNF542P-204ENST00000482727 1305 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AC010329.2-201ENST00000595195 2737 ntBASIC0.92□□□□□ -2.26
USH2AO75445 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
USH2AO75445 SNORA41-201ENST00000384675 132 ntBASIC0.92□□□□□ -2.26
USH2AO75445 HMGB3P23-201ENST00000414981 585 ntBASIC0.92□□□□□ -2.26
USH2AO75445 MTCO3P20-201ENST00000454926 688 ntBASIC0.92□□□□□ -2.26
USH2AO75445 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.92□□□□□ -2.26
USH2AO75445 OR52A4P-203ENST00000498233 1014 ntBASIC0.92□□□□□ -2.26
USH2AO75445 NARSP2-201ENST00000518524 679 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 AC131902.3-201ENST00000611767 581 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AC009237.17-201ENST00000618111 748 ntBASIC0.92□□□□□ -2.26
USH2AO75445 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC0.91□□□□□ -2.26
USH2AO75445 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 ZNF603P-201ENST00000405613 487 ntBASIC0.91□□□□□ -2.26
USH2AO75445 FAT1P1-201ENST00000406588 507 ntBASIC0.91□□□□□ -2.26
USH2AO75445 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AP000942.1-201ENST00000463969 747 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.91□□□□□ -2.26
USH2AO75445 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 MTND4P10-201ENST00000446199 1363 ntBASIC0.91□□□□□ -2.26
USH2AO75445 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC0.91□□□□□ -2.26
USH2AO75445 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 TEX21P-201ENST00000447107 1476 ntBASIC0.91□□□□□ -2.26
USH2AO75445 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 OR11H5P-202ENST00000641612 1325 ntBASIC0.91□□□□□ -2.26
USH2AO75445 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 RPL31P2-201ENST00000413849 377 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AC023128.2-201ENST00000420880 1223 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AC009263.1-201ENST00000441193 1239 ntBASIC0.91□□□□□ -2.26
USH2AO75445 RPS15AP1-201ENST00000457423 391 ntBASIC0.91□□□□□ -2.26
USH2AO75445 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.91□□□□□ -2.26
USH2AO75445 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 AC136443.5-201ENST00000603741 370 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AP000787.2-201ENST00000604432 568 ntBASIC0.91□□□□□ -2.26
USH2AO75445 CYP3A51P-201ENST00000633513 256 ntBASIC0.91□□□□□ -2.26
USH2AO75445 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 AL138785.1-201ENST00000425821 331 ntBASIC0.91□□□□□ -2.26
USH2AO75445 RPL23AP74-201ENST00000437246 471 ntBASIC0.91□□□□□ -2.26
USH2AO75445 CACYBPP1-201ENST00000438592 684 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC0.91□□□□□ -2.26
USH2AO75445 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.91□□□□□ -2.26
USH2AO75445 AP001207.1-201ENST00000524051 481 ntBASIC0.91□□□□□ -2.26
USH2AO75445 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 MIR1273G-201ENST00000577677 100 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AC006272.2-201ENST00000594725 163 ntBASIC0.91□□□□□ -2.26
USH2AO75445 DDX43P2-201ENST00000604753 1354 ntBASIC0.91□□□□□ -2.26
USH2AO75445 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC0.91□□□□□ -2.26
USH2AO75445 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
USH2AO75445 RNU6-115P-201ENST00000364310 107 ntBASIC0.91□□□□□ -2.26
USH2AO75445 RPL31P1-201ENST00000398116 372 ntBASIC0.91□□□□□ -2.26
USH2AO75445 TRIAP1P1-201ENST00000427062 225 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AL445669.2-201ENST00000454425 421 ntBASIC0.91□□□□□ -2.26
USH2AO75445 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 HMGN1P7-201ENST00000491722 313 ntBASIC0.91□□□□□ -2.26
USH2AO75445 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
USH2AO75445 MEPE-206ENST00000511670 550 ntTSL 4 BASIC0.91□□□□□ -2.26
USH2AO75445 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC0.91□□□□□ -2.26
USH2AO75445 RMST_9.1-201ENST00000619945 193 ntBASIC0.91□□□□□ -2.26
USH2AO75445 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
USH2AO75445 PROS2P-201ENST00000474651 1951 ntBASIC0.9□□□□□ -2.26
USH2AO75445 OR4G1P-203ENST00000641984 1631 ntBASIC0.9□□□□□ -2.26
USH2AO75445 RAD1P1-201ENST00000231383 813 ntBASIC0.9□□□□□ -2.26
USH2AO75445 RNU4-41P-201ENST00000364426 143 ntBASIC0.9□□□□□ -2.26
USH2AO75445 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.26
USH2AO75445 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC0.9□□□□□ -2.26
USH2AO75445 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC0.9□□□□□ -2.26
USH2AO75445 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC0.9□□□□□ -2.26
USH2AO75445 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC0.9□□□□□ -2.26
USH2AO75445 AC004263.1-201ENST00000479327 332 ntBASIC0.9□□□□□ -2.26
USH2AO75445 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.9□□□□□ -2.26
USH2AO75445 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.26
USH2AO75445 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.9□□□□□ -2.26
USH2AO75445 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
USH2AO75445 AL133412.1-201ENST00000380194 2992 ntBASIC0.9□□□□□ -2.26
USH2AO75445 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC0.9□□□□□ -2.26
USH2AO75445 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
USH2AO75445 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC0.9□□□□□ -2.27
USH2AO75445 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms