Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 MTATP6P3-201ENST00000581686 676 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.63□□□□□ -1.83
CACNA1FO60840 VN1R83P-201ENST00000595685 445 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AL020997.3-201ENST00000602843 359 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC064872.1-201ENST00000604823 1072 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC006111.3-201ENST00000622137 383 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AL049737.1-201ENST00000413920 1403 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1FO60840 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC000367.1-201ENST00000452711 1766 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1FO60840 RNU6-224P-201ENST00000384055 107 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AL031121.1-201ENST00000406553 254 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 RNU4-72P-201ENST00000410754 173 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC236972.1-201ENST00000433225 199 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC234064.1-201ENST00000436312 247 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 MTND4P6-201ENST00000438297 472 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 HMGB3P21-201ENST00000452483 547 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 RPL30P6-201ENST00000475925 342 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC109329.2-201ENST00000519658 482 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.63□□□□□ -1.83
CACNA1FO60840 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 MIR4672-201ENST00000583126 81 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 ZNF663P-202ENST00000641770 1131 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AL356473.1-201ENST00000406203 1408 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CACNA1FO60840 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.62□□□□□ -1.83
CACNA1FO60840 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1FO60840 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1FO60840 snoZ40.1-201ENST00000364540 72 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 RNU6-1200P-201ENST00000384162 107 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 DLGAP5P1-201ENST00000430307 464 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC087499.2-201ENST00000432861 149 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC092170.1-201ENST00000440211 356 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 ELOCP30-201ENST00000447108 299 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 RPS27AP8-201ENST00000452665 445 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 NECAP1P2-201ENST00000455668 727 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 MTCO2P18-201ENST00000457151 658 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AL117351.2-201ENST00000513571 157 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 RNA5SP367-201ENST00000516557 118 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 RPL12P22-201ENST00000519073 490 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CACNA1FO60840 SMARCE1P4-201ENST00000523647 241 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 DUXAP1-201ENST00000556632 463 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AADACP1-206ENST00000561502 1193 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 MIR548Y-201ENST00000582739 110 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC090616.2-202ENST00000584248 222 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC007619.2-201ENST00000605743 379 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AL513477.2-201ENST00000607858 568 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC000123.2-201ENST00000623124 461 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC005858.4-201ENST00000623191 700 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC096656.1-201ENST00000623826 1364 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.62□□□□□ -1.83
CACNA1FO60840 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 Y_RNA.192-201ENST00000363977 102 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 Y_RNA.510-201ENST00000384511 114 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 Y_RNA.560-201ENST00000384689 102 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 RNU6-648P-201ENST00000410190 107 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 Y_RNA.599-201ENST00000410489 109 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.62□□□□□ -1.83
CACNA1FO60840 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CACNA1FO60840 MTND2P19-201ENST00000449129 1012 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 RFC5P1-201ENST00000454419 874 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC003982.1-202ENST00000469928 248 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC091860.1-201ENST00000505723 432 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms