Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA3O60609 AC133134.1-201ENST00000466800 359 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 RPL31P60-201ENST00000478450 367 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 RN7SL459P-201ENST00000481078 302 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.84□□□□□ -1.47
GFRA3O60609 CASP1P1-201ENST00000526345 212 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.84□□□□□ -1.47
GFRA3O60609 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 AL158032.1-201ENST00000605401 106 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 AC100778.3-201ENST00000580060 1750 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
GFRA3O60609 AC009237.3-203ENST00000442128 3551 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 MAPK10-365ENST00000641902 3825 ntBASIC5.84□□□□□ -1.48
GFRA3O60609 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA3O60609 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 AL451142.2-201ENST00000429076 2090 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 AC092821.3-202ENST00000641304 2767 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 RNU1-85P-201ENST00000364127 164 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 RNU6-275P-201ENST00000364910 107 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 RNU6-813P-201ENST00000384691 107 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 MIR199B-201ENST00000384849 110 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 RN7SKP114-201ENST00000410327 279 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AL158823.1-201ENST00000418441 478 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC093162.1-201ENST00000419682 124 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC113412.1-201ENST00000425840 504 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC016712.1-201ENST00000431088 378 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA3O60609 RPL23AP15-201ENST00000450202 459 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 FABP5P13-201ENST00000452144 328 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 RNU7-87P-201ENST00000459343 62 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC021205.1-201ENST00000468797 348 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.83□□□□□ -1.48
GFRA3O60609 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA3O60609 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.83□□□□□ -1.48
GFRA3O60609 OR1M4P-201ENST00000589199 287 ntBASIC5.83□□□□□ -1.48
GFRA3O60609 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA3O60609 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA3O60609 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.83□□□□□ -1.48
GFRA3O60609 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.83□□□□□ -1.48
GFRA3O60609 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
GFRA3O60609 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GFRA3O60609 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.82□□□□□ -1.48
GFRA3O60609 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
GFRA3O60609 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 AC092079.1-201ENST00000558620 1985 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GFRA3O60609 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA3O60609 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
GFRA3O60609 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GFRA3O60609 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GFRA3O60609 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GFRA3O60609 RNU6-263P-201ENST00000363811 107 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 RNU1-32P-201ENST00000363937 159 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 SNORA43.1-201ENST00000364863 140 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 MIR649-201ENST00000384843 97 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 MIR640-201ENST00000385086 96 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 RNU1-77P-201ENST00000390868 162 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 SNORA40.5-201ENST00000391061 128 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 SNORA46.1-201ENST00000391069 153 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 AC116036.1-201ENST00000412199 367 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA3O60609 AL663074.2-201ENST00000440621 479 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 GAPDHP25-201ENST00000447061 1001 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 AC009237.7-201ENST00000447357 229 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 RN7SL604P-201ENST00000492589 296 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 AL590705.4-201ENST00000532209 134 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 FKBP1BP1-201ENST00000553366 325 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.82□□□□□ -1.48
GFRA3O60609 MIR4431-201ENST00000579990 94 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 AC006116.3-201ENST00000592968 361 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 HSPE1P14-201ENST00000605812 302 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 AP001340.1-201ENST00000624405 217 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GFRA3O60609 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
GFRA3O60609 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.82□□□□□ -1.48
GFRA3O60609 AL355488.2-201ENST00000609909 2850 ntBASIC5.82□□□□□ -1.48
GFRA3O60609 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.82□□□□□ -1.48
GFRA3O60609 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms