Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.4□□□□□ -1.38
ACTN4O43707 BX842559.1-201ENST00000419615 532 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AC007098.1-201ENST00000420122 367 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.4□□□□□ -1.38
ACTN4O43707 AC069213.2-201ENST00000420238 366 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.4□□□□□ -1.38
ACTN4O43707 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.4□□□□□ -1.38
ACTN4O43707 AC127537.2-201ENST00000439258 465 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 Z95327.1-201ENST00000446082 482 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.4□□□□□ -1.38
ACTN4O43707 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.4□□□□□ -1.38
ACTN4O43707 AC010733.1-201ENST00000451515 401 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RPS23P2-201ENST00000463671 415 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RPL32P33-201ENST00000487023 394 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 GLUD1P3-202ENST00000508551 200 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AC074255.1-201ENST00000511259 501 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 Y_RNA.689-201ENST00000516589 107 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 RNU6-85P-201ENST00000605989 107 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AC024884.1-201ENST00000620583 399 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 AC007998.5-201ENST00000622938 237 ntBASIC6.4□□□□□ -1.38
ACTN4O43707 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
ACTN4O43707 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.4□□□□□ -1.39
ACTN4O43707 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ACTN4O43707 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.4□□□□□ -1.39
ACTN4O43707 AC011978.2-201ENST00000569835 2054 ntBASIC6.4□□□□□ -1.39
ACTN4O43707 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.39□□□□□ -1.39
ACTN4O43707 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ACTN4O43707 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ACTN4O43707 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.39□□□□□ -1.39
ACTN4O43707 AC239868.2-201ENST00000564237 4527 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ACTN4O43707 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ACTN4O43707 RNU6-858P-201ENST00000362436 107 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RNU1-65P-201ENST00000363919 148 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RNU6-637P-201ENST00000384050 107 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 Y_RNA.480-201ENST00000384364 102 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AL030996.1-201ENST00000411430 235 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 MRPS21P2-201ENST00000424704 264 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RPL23AP22-201ENST00000437556 453 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AL133244.1-201ENST00000456007 258 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 SNORD125-201ENST00000459538 96 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC005165.2-201ENST00000466070 380 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AP000797.2-201ENST00000475768 606 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC109925.1-201ENST00000478069 331 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RPL31P60-201ENST00000478450 367 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RN7SL570P-201ENST00000484405 292 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC008958.1-201ENST00000511047 682 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RNU7-200P-201ENST00000516105 62 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 RN7SKP70-201ENST00000516655 271 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC022559.1-201ENST00000520905 205 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.39□□□□□ -1.39
ACTN4O43707 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.39□□□□□ -1.39
ACTN4O43707 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.39□□□□□ -1.39
ACTN4O43707 AC127381.1-201ENST00000555979 939 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC002310.3-201ENST00000569728 723 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.39□□□□□ -1.39
ACTN4O43707 MIR376A1-201ENST00000616574 68 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ACTN4O43707 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.39□□□□□ -1.39
ACTN4O43707 AL034546.1-201ENST00000623740 3693 ntBASIC6.39□□□□□ -1.39
ACTN4O43707 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
ACTN4O43707 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ACTN4O43707 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 Z75746.1-201ENST00000440243 2080 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.38□□□□□ -1.39
ACTN4O43707 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ACTN4O43707 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
ACTN4O43707 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.38□□□□□ -1.39
ACTN4O43707 Y_RNA.16-201ENST00000362421 102 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 Y_RNA.304-201ENST00000365011 112 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ACTN4O43707 SNORD115-46-201ENST00000390982 71 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 RNU6-754P-201ENST00000391166 107 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.38□□□□□ -1.39
ACTN4O43707 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.38□□□□□ -1.39
ACTN4O43707 AC126120.1-201ENST00000431082 470 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.38□□□□□ -1.39
ACTN4O43707 AC118758.1-202ENST00000454719 225 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 AC004453.1-201ENST00000487895 408 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.38□□□□□ -1.39
ACTN4O43707 AC025458.1-201ENST00000506046 166 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.38□□□□□ -1.39
ACTN4O43707 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.38□□□□□ -1.39
ACTN4O43707 AC005798.1-201ENST00000513715 387 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 SCARNA24.2-201ENST00000516968 130 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 IGKV2-38-201ENST00000517443 247 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 IGLV3-24-201ENST00000517477 197 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.38□□□□□ -1.39
ACTN4O43707 MIR4643-201ENST00000577473 78 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 AC073657.2-201ENST00000605661 303 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.38□□□□□ -1.39
ACTN4O43707 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 AC110801.1-201ENST00000623590 212 ntBASIC6.38□□□□□ -1.39
ACTN4O43707 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ACTN4O43707 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.38□□□□□ -1.39
ACTN4O43707 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms