Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL512504.1-201ENST00000415494 778 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RPLP0P7-201ENST00000416050 667 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 FABP5P3-201ENST00000437960 408 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RNF2P1-201ENST00000442955 1010 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGB3O15347 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HMGB3O15347 AC133134.1-201ENST00000466800 359 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 MRPL42P6-201ENST00000486397 371 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RPS15AP34-201ENST00000487776 387 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGB3O15347 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGB3O15347 RNA5SP24-201ENST00000516478 95 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 RNA5SP471-201ENST00000516971 106 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 SNORA31.21-201ENST00000517180 77 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 HMGB1P46-201ENST00000520062 610 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AP000790.1-201ENST00000528891 737 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
HMGB3O15347 CKS1BP1-201ENST00000555221 240 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AC010546.1-201ENST00000569391 485 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AC012254.4-201ENST00000588843 273 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AC125494.3-201ENST00000602759 455 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AC012669.1-201ENST00000603209 283 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AP004247.3-201ENST00000608682 624 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 AC011890.2-201ENST00000613393 294 ntBASIC2.07□□□□□ -2.08
HMGB3O15347 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
HMGB3O15347 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
HMGB3O15347 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGB3O15347 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HMGB3O15347 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGB3O15347 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGB3O15347 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGB3O15347 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HMGB3O15347 RNU6-444P-201ENST00000383988 108 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AL513475.1-201ENST00000406602 315 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGB3O15347 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGB3O15347 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HMGB3O15347 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGB3O15347 MRPS33P4-201ENST00000434892 317 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 NDUFB4P6-201ENST00000436819 366 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AL591503.2-201ENST00000442314 1005 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGB3O15347 AC104389.3-201ENST00000445629 235 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AC011753.1-201ENST00000451001 220 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AC006499.5-201ENST00000505037 514 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGB3O15347 SNORA70.16-201ENST00000516390 95 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AC083923.1-201ENST00000523708 376 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.06□□□□□ -2.08
HMGB3O15347 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
HMGB3O15347 AC006329.2-201ENST00000611491 394 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGB3O15347 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGB3O15347 AC024595.1-201ENST00000623088 387 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 AC092608.3-201ENST00000625017 386 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 MFSD8-245ENST00000641743 948 ntBASIC2.06□□□□□ -2.08
HMGB3O15347 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGB3O15347 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGB3O15347 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HMGB3O15347 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HMGB3O15347 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGB3O15347 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGB3O15347 SNORA41-201ENST00000384675 132 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 RNU6-193P-201ENST00000410977 107 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 MTND1P33-201ENST00000446251 917 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 RPS27P23-201ENST00000487608 251 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 RNA5SP402-201ENST00000517148 110 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 SUB1P1-201ENST00000524415 382 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGB3O15347 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.05□□□□□ -2.08
HMGB3O15347 OR1M4P-201ENST00000589199 287 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AC012493.2-201ENST00000595083 291 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 VN1R78P-201ENST00000597393 564 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 NRBF2P5-201ENST00000603087 788 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AC104237.2-201ENST00000612456 443 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AL161629.2-201ENST00000615347 275 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGB3O15347 AC027309.3-201ENST00000623419 351 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB3O15347 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 MTND5P31-201ENST00000419366 1374 ntBASIC2.05□□□□□ -2.08
HMGB3O15347 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HMGB3O15347 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.05□□□□□ -2.08
HMGB3O15347 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
HMGB3O15347 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
HMGB3O15347 FRG1BP-201ENST00000278882 761 ntBASIC2.04□□□□□ -2.08
HMGB3O15347 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms