Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC244035.1-201ENST00000430042 390 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD9O15198 RPS11P1-201ENST00000451072 473 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 AL122001.1-201ENST00000457027 370 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 RPL31P3-201ENST00000458430 332 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD9O15198 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD9O15198 AC116337.2-201ENST00000477662 156 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.6□□□□□ -1.83
SMAD9O15198 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD9O15198 IGKV2-38-201ENST00000517443 247 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 AC025881.1-201ENST00000518851 512 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 MTND4LP18-201ENST00000526864 291 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SMAD9O15198 AC012182.1-201ENST00000570133 895 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 OR4K8P-201ENST00000578842 1048 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 AL590282.1-201ENST00000610379 1136 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 AC002550.2-201ENST00000621246 394 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 Z69908.1-201ENST00000622603 247 ntBASIC3.6□□□□□ -1.83
SMAD9O15198 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.6□□□□□ -1.83
SMAD9O15198 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD9O15198 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD9O15198 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD9O15198 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD9O15198 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD9O15198 SNORD116-9-201ENST00000384000 95 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 SNORD116-3-201ENST00000384287 95 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 SNORD116-7-201ENST00000384404 95 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 RNU6-809P-201ENST00000384461 107 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 SNORD116-5-201ENST00000384462 95 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SMAD9O15198 RN7SKP202-201ENST00000410439 330 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 AL159169.1-201ENST00000421119 127 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 AL117339.2-201ENST00000430475 180 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 UBE2V1P13-201ENST00000436983 439 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC108734.1-201ENST00000439549 399 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 TRIM60P18-201ENST00000441518 828 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 KATNBL1P3-201ENST00000443475 909 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 GDI2P2-201ENST00000445131 608 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 COX6CP12-201ENST00000446748 202 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 RPS24P6-201ENST00000452670 400 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AC234775.1-201ENST00000454247 670 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AC104308.1-201ENST00000454621 333 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 CFTRP1-201ENST00000456646 183 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD9O15198 AC108064.1-201ENST00000513791 460 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 RNU6-528P-201ENST00000516926 100 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 AP003497.1-201ENST00000528472 562 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC018630.1-201ENST00000541376 925 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD9O15198 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC022968.1-201ENST00000567372 442 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.59□□□□□ -1.83
SMAD9O15198 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.59□□□□□ -1.83
SMAD9O15198 TPMTP1-201ENST00000592307 737 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AC244505.7-201ENST00000599675 272 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AL031985.2-201ENST00000600955 480 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.59□□□□□ -1.83
SMAD9O15198 AC093783.1-201ENST00000612976 329 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 AL391261.4-201ENST00000616012 481 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.59□□□□□ -1.83
SMAD9O15198 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMAD9O15198 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
SMAD9O15198 AP002001.2-201ENST00000529025 1469 ntBASIC3.59□□□□□ -1.84
SMAD9O15198 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMAD9O15198 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SMAD9O15198 AC092125.1-201ENST00000562568 1995 ntBASIC3.58□□□□□ -1.84
SMAD9O15198 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMAD9O15198 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.58□□□□□ -1.84
SMAD9O15198 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms