Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHD1O14646 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHD1O14646 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHD1O14646 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD1O14646 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHD1O14646 AC011155.1-201ENST00000316512 456 ntBASIC3.2□□□□□ -1.9
CHD1O14646 U8.8-201ENST00000365399 135 ntBASIC3.2□□□□□ -1.9
CHD1O14646 RNU1-138P-201ENST00000384093 164 ntBASIC3.2□□□□□ -1.9
CHD1O14646 AC244505.4-201ENST00000434905 287 ntBASIC3.2□□□□□ -1.9
CHD1O14646 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.2□□□□□ -1.9
CHD1O14646 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.2□□□□□ -1.9
CHD1O14646 SSXP5-201ENST00000443473 287 ntBASIC3.2□□□□□ -1.9
CHD1O14646 TVP23BP2-201ENST00000455082 615 ntBASIC3.2□□□□□ -1.9
CHD1O14646 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.2□□□□□ -1.9
CHD1O14646 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CHD1O14646 Y_RNA.112-201ENST00000363250 102 ntBASIC3.19□□□□□ -1.9
CHD1O14646 RNU1-57P-201ENST00000384491 166 ntBASIC3.19□□□□□ -1.9
CHD1O14646 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD1O14646 SNRPFP4-201ENST00000456366 242 ntBASIC3.19□□□□□ -1.9
CHD1O14646 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
CHD1O14646 AC007182.2-201ENST00000489251 402 ntBASIC3.19□□□□□ -1.9
CHD1O14646 SNORA25.15-201ENST00000516487 89 ntBASIC3.19□□□□□ -1.9
CHD1O14646 FAM92A1P1-201ENST00000528023 890 ntBASIC3.19□□□□□ -1.9
CHD1O14646 MIR6504-201ENST00000613520 61 ntBASIC3.19□□□□□ -1.9
CHD1O14646 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
CHD1O14646 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD1O14646 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD1O14646 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD1O14646 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHD1O14646 Y_RNA.191-201ENST00000363972 113 ntBASIC3.19□□□□□ -1.9
CHD1O14646 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.19□□□□□ -1.9
CHD1O14646 AL390023.1-201ENST00000428836 262 ntBASIC3.19□□□□□ -1.9
CHD1O14646 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD1O14646 MTND4LP12-201ENST00000448237 295 ntBASIC3.19□□□□□ -1.9
CHD1O14646 RNA5SP182-201ENST00000516064 82 ntBASIC3.19□□□□□ -1.9
CHD1O14646 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.19□□□□□ -1.9
CHD1O14646 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD1O14646 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.19□□□□□ -1.9
CHD1O14646 AP000790.1-201ENST00000528891 737 ntBASIC3.19□□□□□ -1.9
CHD1O14646 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.19□□□□□ -1.9
CHD1O14646 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
CHD1O14646 SNRPGP19-201ENST00000603826 189 ntBASIC3.19□□□□□ -1.9
CHD1O14646 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
CHD1O14646 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CHD1O14646 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD1O14646 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHD1O14646 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD1O14646 Z82209.1-201ENST00000422141 2135 ntBASIC3.18□□□□□ -1.9
CHD1O14646 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD1O14646 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD1O14646 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHD1O14646 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
CHD1O14646 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CHD1O14646 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.18□□□□□ -1.9
CHD1O14646 AC009237.8-201ENST00000445492 379 ntBASIC3.18□□□□□ -1.9
CHD1O14646 AC243772.1-201ENST00000451620 410 ntBASIC3.18□□□□□ -1.9
CHD1O14646 AC005951.1-201ENST00000576706 485 ntBASIC3.18□□□□□ -1.9
CHD1O14646 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.18□□□□□ -1.9
CHD1O14646 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD1O14646 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD1O14646 RNU6-146P-201ENST00000384602 108 ntBASIC3.17□□□□□ -1.9
CHD1O14646 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHD1O14646 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
CHD1O14646 AC005005.2-201ENST00000420779 380 ntBASIC3.17□□□□□ -1.9
CHD1O14646 MTCYBP31-201ENST00000438855 1122 ntBASIC3.17□□□□□ -1.9
CHD1O14646 MOB1AP2-201ENST00000446060 614 ntBASIC3.17□□□□□ -1.9
CHD1O14646 AC010678.1-201ENST00000614118 713 ntBASIC3.17□□□□□ -1.9
CHD1O14646 CYP3A51P-201ENST00000633513 256 ntBASIC3.17□□□□□ -1.9
CHD1O14646 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.17□□□□□ -1.9
CHD1O14646 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD1O14646 AC245100.2-201ENST00000454544 1679 ntBASIC3.17□□□□□ -1.9
CHD1O14646 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD1O14646 GSTA12P-201ENST00000402398 508 ntBASIC3.16□□□□□ -1.9
CHD1O14646 AL353093.1-201ENST00000441292 436 ntBASIC3.16□□□□□ -1.9
CHD1O14646 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD1O14646 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD1O14646 AC004943.3-201ENST00000624116 600 ntBASIC3.16□□□□□ -1.9
CHD1O14646 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD1O14646 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
CHD1O14646 AC004965.1-201ENST00000413033 213 ntBASIC3.16□□□□□ -1.9
CHD1O14646 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD1O14646 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.16□□□□□ -1.9
CHD1O14646 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.16□□□□□ -1.9
CHD1O14646 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
CHD1O14646 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
CHD1O14646 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD1O14646 VN1R7P-201ENST00000619242 903 ntBASIC3.16□□□□□ -1.9
CHD1O14646 AF127577.6-201ENST00000623352 2191 ntBASIC3.15□□□□□ -1.9
CHD1O14646 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CHD1O14646 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CHD1O14646 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHD1O14646 RNU6-392P-201ENST00000364926 101 ntBASIC3.15□□□□□ -1.91
CHD1O14646 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.15□□□□□ -1.91
CHD1O14646 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.15□□□□□ -1.91
CHD1O14646 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD1O14646 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHD1O14646 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
CHD1O14646 RNU6-250P-201ENST00000516958 103 ntBASIC3.15□□□□□ -1.91
CHD1O14646 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHD1O14646 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms