Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 PCBP2P3-201ENST00000509726 843 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC104986.1-201ENST00000517978 436 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC023050.2-201ENST00000544968 387 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC008127.2-201ENST00000549925 1075 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 ZNF192P1-203ENST00000565888 810 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AL158211.1-201ENST00000566763 763 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 MTATP6P24-201ENST00000576835 677 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 OR4K7P-201ENST00000580232 945 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 HMGN2P28-201ENST00000606102 262 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC131235.4-201ENST00000609288 620 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AL450489.1-201ENST00000612071 468 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC110801.1-201ENST00000623590 212 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 ZNF542P-204ENST00000482727 1305 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 ZNF37BP-203ENST00000452306 1352 ntBASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU6-989P-201ENST00000362756 107 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 SNORD113-6-201ENST00000363345 75 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 SNRPEP2-201ENST00000397592 279 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AL138799.3-201ENST00000438968 350 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 snoU13.3-201ENST00000459441 104 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 MTCYBP17-201ENST00000503579 789 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC093767.1-201ENST00000504523 156 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC112673.1-201ENST00000513168 575 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 GMPSP1-201ENST00000514075 579 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 RNA5SP341-201ENST00000516261 117 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 EEF1A1P37-201ENST00000522748 715 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC106782.4-201ENST00000568264 210 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC025588.2-201ENST00000604851 466 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC097478.2-201ENST00000610572 514 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC073968.1-201ENST00000618594 637 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC018816.2-201ENST00000621460 353 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC116618.1-201ENST00000634617 774 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 U6.101-201ENST00000637707 76 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AC092326.2-201ENST00000624772 1561 ntBASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.32□□□□□ -1.88
NEDD8-MDP1E9PL57 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 MTCO1P23-201ENST00000415223 1526 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 Y_RNA.311-201ENST00000365068 96 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 MT-TC-201ENST00000387405 66 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AL008987.1-201ENST00000415528 237 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 BX890604.2-201ENST00000427883 474 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC092427.1-201ENST00000439177 601 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 USP9YP34-201ENST00000453983 808 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC020893.1-201ENST00000502452 580 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC109445.1-201ENST00000512356 383 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU6-583P-201ENST00000516012 92 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 RNY4P37-201ENST00000516225 96 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC107954.1-201ENST00000565906 727 ntBASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD8-MDP1E9PL57 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms