Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-511P-201ENST00000363496 107 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 RNU6-1090P-201ENST00000364065 94 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 RNU6-534P-201ENST00000364877 106 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 Y_RNA.390-201ENST00000383932 102 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 RNU11-4P-201ENST00000391149 133 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 CCDC58P2-201ENST00000417131 366 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 USP9YP27-201ENST00000418455 438 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AL137014.1-201ENST00000420490 1226 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC099677.1-201ENST00000420575 175 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 MTCO1P20-201ENST00000425366 358 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC092651.1-201ENST00000426110 312 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 HMGB1P31-201ENST00000437242 427 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC016696.1-201ENST00000446949 318 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 ABCF2P2-201ENST00000450549 296 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AL691482.1-201ENST00000453255 87 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 RPS29P25-201ENST00000481709 171 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 RPL36AP51-201ENST00000487216 318 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC103783.1-201ENST00000520506 373 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AP000907.4-201ENST00000604143 237 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC008536.2-201ENST00000607284 349 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 TUG1_1.1-201ENST00000610654 145 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC022106.2-201ENST00000620114 757 ntBASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 Y_RNA.89-201ENST00000363031 102 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RNU6-1249P-201ENST00000363237 111 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RNU6-637P-201ENST00000384050 107 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RNU6-456P-201ENST00000384493 107 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AL583834.1-201ENST00000406943 343 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RNU4-78P-201ENST00000410940 126 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RPS12P23-201ENST00000419579 400 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RAD23BP3-201ENST00000454157 1152 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RPL36AP13-201ENST00000457490 317 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC083798.1-201ENST00000472671 131 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC074344.1-201ENST00000512823 224 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 SCARNA24.1-201ENST00000516465 137 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RNU6-798P-201ENST00000516912 103 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RNU6-410P-201ENST00000517006 107 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 IFITM8P-201ENST00000522529 394 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AL133271.1-201ENST00000538229 291 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC018630.1-201ENST00000541376 925 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC012669.1-201ENST00000603209 283 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC007621.1-201ENST00000604544 437 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AP001596.2-201ENST00000608410 312 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AL603758.1-201ENST00000618654 241 ntBASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC85CA6NKD9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AL158163.1-201ENST00000603915 1649 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 HSPE1P11-201ENST00000339579 310 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 RNU6-223P-201ENST00000362830 107 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 RNU6-483P-201ENST00000384088 108 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AL122016.1-201ENST00000403365 367 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms