Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 RNU5A-1-201ENST00000362698 116 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 RNA5SP307-201ENST00000362863 116 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 RNU6-1284P-201ENST00000363701 100 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 MIR765-201ENST00000390226 114 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 TXNP7-201ENST00000406296 293 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 Z98941.1-201ENST00000407764 100 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 SNORA3C-201ENST00000408792 125 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 RPL27AP8-201ENST00000424277 446 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 ISCA1P6-201ENST00000427740 390 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC119618.1-201ENST00000434191 222 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC104850.1-201ENST00000435940 476 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 CYCSP43-201ENST00000438233 310 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 CBX1P1-201ENST00000440184 427 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 TXNP1-201ENST00000441872 371 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 GAPDHP27-201ENST00000447427 1020 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC073850.1-201ENST00000449243 255 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 ABCF2P2-201ENST00000450549 296 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 RPL23AP56-201ENST00000460778 453 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 RPSAP50-201ENST00000481955 852 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC069499.1-201ENST00000489433 509 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 RN7SL629P-201ENST00000489622 285 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 SNORA70.16-201ENST00000516390 95 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 RNU6-430P-201ENST00000517078 107 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 AL391156.1-201ENST00000554965 554 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 RPL23AP97-201ENST00000568955 471 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.84□□□□□ -1.79
HMX3A6NHT5 AL136363.2-201ENST00000604173 851 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AP000860.1-201ENST00000605250 559 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AL139286.2-201ENST00000606838 396 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AP002826.1-201ENST00000608835 315 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC005332.10-201ENST00000612725 619 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC008498.1-201ENST00000613012 531 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC091834.1-201ENST00000614543 472 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 SNHG22-203ENST00000617833 660 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC072046.2-201ENST00000618366 268 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AC006338.1-201ENST00000618453 749 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 AL353662.3-201ENST00000625131 237 ntBASIC3.84□□□□□ -1.79
HMX3A6NHT5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMX3A6NHT5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMX3A6NHT5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMX3A6NHT5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMX3A6NHT5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMX3A6NHT5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMX3A6NHT5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 SNORA74A-201ENST00000364089 198 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 U3.11-201ENST00000364476 212 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AL359634.1-202ENST00000404721 284 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 RNU6-195P-201ENST00000411352 109 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 RPL23AP26-201ENST00000412728 464 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 MTND3P17-201ENST00000416968 344 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC008850.1-201ENST00000427546 362 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC137499.1-201ENST00000427602 88 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 USP12PX-201ENST00000432383 1057 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 PTMAP6-201ENST00000439110 327 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AL359385.1-201ENST00000456509 365 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC010631.1-201ENST00000474150 156 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 MTCO2P4-201ENST00000517968 247 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC078795.2-201ENST00000602835 1252 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC245014.2-201ENST00000603689 287 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC091805.2-201ENST00000603848 235 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AL161729.4-201ENST00000604650 476 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC246785.4-201ENST00000605374 287 ntBASIC3.83□□□□□ -1.8
HMX3A6NHT5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.83□□□□□ -1.8
HMX3A6NHT5 AC013476.2-201ENST00000614456 459 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms