Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-730P-201ENST00000383954 104 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AL023807.1-201ENST00000407932 359 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 RNA5SP56-201ENST00000410277 118 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 Z75741.2-201ENST00000417272 1167 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC244098.2-201ENST00000422068 99 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC241584.1-201ENST00000438469 1241 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 RPS24P13-201ENST00000442520 397 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 NIPA2P5-201ENST00000452282 464 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 snoU13.3-201ENST00000459441 104 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 RPL21P104-201ENST00000464143 478 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 VN1R104P-201ENST00000505115 1009 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 BOLA3P3-201ENST00000505182 232 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC027309.2-201ENST00000520566 192 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 FAM60DP-201ENST00000524174 632 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC090502.2-201ENST00000549267 280 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC034105.3-201ENST00000565294 442 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 MIR3912-201ENST00000577566 105 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 SNRPGP15-201ENST00000600149 222 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AL009028.1-201ENST00000604895 802 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC006023.2-201ENST00000609916 167 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AL138478.1-201ENST00000612252 832 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC008083.4-201ENST00000615076 444 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC009318.4-201ENST00000620496 486 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC022509.4-201ENST00000621404 572 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 OR4G3P-201ENST00000633500 913 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 AC109315.1-201ENST00000584143 1347 ntBASIC3.09□□□□□ -1.91
SMIM28A0A1B0GU29 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.92
SMIM28A0A1B0GU29 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SMIM28A0A1B0GU29 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SMIM28A0A1B0GU29 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMIM28A0A1B0GU29 Z99496.1-201ENST00000469424 1477 ntBASIC3.09□□□□□ -1.92
SMIM28A0A1B0GU29 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMIM28A0A1B0GU29 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 ZNF29P-201ENST00000225587 168 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 TMSB4XP8-201ENST00000402089 135 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL450338.1-201ENST00000407987 512 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 TMSB4XP6-201ENST00000415187 135 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 RPS15AP6-201ENST00000420703 385 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC007435.1-201ENST00000421086 415 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL159169.1-201ENST00000421119 127 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 TMSB4XP1-201ENST00000424567 135 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 HMGB1P12-201ENST00000438594 598 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 RPL23AP16-201ENST00000441715 421 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 TXNP1-201ENST00000441872 371 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 TRBV26-201ENST00000456572 344 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC004924.1-201ENST00000480160 781 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 ZNF705CP-201ENST00000530515 889 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 MTCYBP23-201ENST00000558717 1102 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC107954.1-201ENST00000565906 727 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AL669831.4-202ENST00000590817 238 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC069545.1-201ENST00000605671 358 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 RNU4-5P-201ENST00000607255 135 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AP001521.1-201ENST00000609150 300 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 MIR6852-201ENST00000621699 66 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 MKKS-204ENST00000639674 192 ntBASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMIM28A0A1B0GU29 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms