Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 RPL36AP13-201ENST00000457490 317 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 SNORD42A-201ENST00000459584 64 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 ACTR3P3-201ENST00000480448 893 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 LARP1BP2-201ENST00000486594 519 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 RN7SKP298-201ENST00000515950 94 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 CR383656.7-201ENST00000548164 174 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC126177.3-201ENST00000551839 688 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AL157394.1-201ENST00000562983 1224 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 ZNF192P1-203ENST00000565888 810 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 CYP4A43P-201ENST00000568156 121 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC009977.1-201ENST00000586015 570 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC015871.2-201ENST00000603605 948 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC131902.3-201ENST00000611767 581 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 MIR7702-201ENST00000621931 59 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AP005264.7-201ENST00000625003 745 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 AC068724.3-201ENST00000625906 87 ntBASIC3.84□□□□□ -1.79
CLDN16Q9Y5I7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLDN16Q9Y5I7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.84□□□□□ -1.8
CLDN16Q9Y5I7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.84□□□□□ -1.8
CLDN16Q9Y5I7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CLDN16Q9Y5I7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 FRG1BP-201ENST00000278882 761 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 Y_RNA.517-201ENST00000384551 106 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-114P-201ENST00000384704 105 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 CCNG1P1-201ENST00000406783 885 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RNU2-16P-201ENST00000410712 136 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC004552.1-201ENST00000419089 348 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 USP9YP14-201ENST00000430663 563 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 HMGB1P12-201ENST00000438594 598 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC114755.5-201ENST00000447760 831 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RPL23AP62-201ENST00000463396 453 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RPS26P3-201ENST00000470205 348 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RN7SL585P-201ENST00000470538 280 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC006517.1-201ENST00000480485 328 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RPS4XP13-201ENST00000483219 789 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC090543.2-201ENST00000483963 348 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC004057.1-201ENST00000485827 348 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC109464.2-201ENST00000510242 943 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 MTCO2P32-201ENST00000514865 403 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AP000907.2-201ENST00000530827 353 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RPL21P5-201ENST00000554662 472 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC007224.1-201ENST00000564410 144 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AC078795.2-201ENST00000602835 1252 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AL451086.1-201ENST00000605596 223 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 AL356585.4-201ENST00000623078 1229 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 MTCO1P9-201ENST00000505577 1534 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 RLIMP1-201ENST00000339626 1680 ntBASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CLDN16Q9Y5I7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 AC244517.1-201ENST00000606030 2086 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 AC011460.1-201ENST00000636268 1834 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 AP001350.1-201ENST00000601906 1524 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-348P-201ENST00000384386 107 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-297P-201ENST00000384636 107 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-712P-201ENST00000410558 100 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 RNA5SP104-201ENST00000410989 118 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 RPS3AP3-201ENST00000411933 242 ntBASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.82□□□□□ -1.8
CLDN16Q9Y5I7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms