Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC011460.1-201ENST00000636268 1834 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 U3.20-201ENST00000390909 217 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 MIR921-201ENST00000401133 56 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AL049697.2-201ENST00000403708 294 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RN7SKP32-201ENST00000410167 303 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RPS12P10-201ENST00000427031 377 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC233279.1-201ENST00000455300 423 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RN7SL354P-201ENST00000469282 294 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 NIPA2P2-201ENST00000496376 1083 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC103851.1-201ENST00000506833 274 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RNU6-277P-201ENST00000516272 106 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RNU7-30P-201ENST00000516835 62 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC107953.1-201ENST00000522216 297 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 SUB1P1-201ENST00000524415 382 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AL161729.3-201ENST00000603533 673 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 uc_338.5-201ENST00000611839 155 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 AL161616.1-201ENST00000611867 286 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 MIR6864-201ENST00000617935 70 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RMST_7.1-201ENST00000621935 268 ntBASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDHB4Q9Y5E5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL118496.1-201ENST00000440201 1812 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 OR4G1P-203ENST00000641984 1631 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 Y_RNA.255-201ENST00000364581 97 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 Y_RNA.419-201ENST00000384041 102 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 RNU2-50P-201ENST00000410494 143 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 RNU6-1148P-201ENST00000410992 104 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC099336.2-201ENST00000422457 254 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC005534.2-201ENST00000431047 433 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL138799.3-201ENST00000438968 350 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 RPL23AP93-201ENST00000440847 484 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC104308.1-201ENST00000454621 333 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL356010.1-201ENST00000456364 102 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC099560.2-201ENST00000457554 255 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 RPL7P19-201ENST00000469948 618 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC078785.3-201ENST00000476607 425 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC021382.1-201ENST00000483523 359 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 RPL38P4-201ENST00000502376 214 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC026427.2-201ENST00000506228 536 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC112206.3-201ENST00000514578 389 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 PSMA2P1-201ENST00000526365 646 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 uc_338.12-201ENST00000616344 181 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL159972.1-201ENST00000625150 448 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 TPTEP1-208ENST00000636884 213 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 MAPK10-286ENST00000641208 8747 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 AL645937.1-201ENST00000641739 1652 ntBASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB4Q9Y5E5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB4Q9Y5E5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
PCDHB4Q9Y5E5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
PCDHB4Q9Y5E5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB4Q9Y5E5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB4Q9Y5E5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms