Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 RPS26P56-201ENST00000444468 240 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC020550.1-201ENST00000447385 163 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 HMGB3P22-202ENST00000451823 572 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 MTND1P9-201ENST00000453775 944 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC126389.1-201ENST00000477436 290 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 TRBVA-201ENST00000498804 316 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 CCDC34P1-201ENST00000507441 517 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AL117187.1-201ENST00000555482 181 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 TVP23CP2-201ENST00000571473 623 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 MIR4270-201ENST00000581799 70 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AC022893.3-201ENST00000607665 437 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AL596245.1-201ENST00000618994 362 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 AP000542.2-201ENST00000623199 6179 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.16□□□□□ -1.42
CHMP3Q9Y3E7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 MAPK10-263ENST00000641052 4307 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RNA5SP391-201ENST00000363456 119 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.401-201ENST00000383965 117 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-641P-201ENST00000384006 107 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RPL37P10-201ENST00000412884 288 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 TBCAP2-201ENST00000416175 326 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 GNG5P5-201ENST00000420444 220 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RPL31P12-201ENST00000422587 358 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC234779.1-201ENST00000425910 285 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 MED13P1-201ENST00000428342 171 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 FABP7P2-201ENST00000429946 379 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC005019.1-201ENST00000436455 431 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 OR1H1P-201ENST00000448731 937 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 DHFRP3-201ENST00000455595 559 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 MTCO3P10-201ENST00000455912 772 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC006511.1-201ENST00000470614 315 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RN7SL441P-201ENST00000492388 296 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC008897.1-201ENST00000494006 347 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC116562.3-201ENST00000506136 177 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC002456.2-201ENST00000509356 380 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC016559.2-201ENST00000510759 359 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RN7SKP24-201ENST00000515888 284 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-988P-201ENST00000519081 107 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 HMGB1P41-201ENST00000520234 440 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AP003122.3-201ENST00000526316 255 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC068587.5-201ENST00000528506 175 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AP000889.2-201ENST00000532684 490 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC090615.1-201ENST00000577519 154 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 MIR4703-201ENST00000577728 79 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 MIR4737-201ENST00000583979 81 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC010424.2-201ENST00000607594 443 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AC005014.2-201ENST00000607795 599 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 OR52H1-202ENST00000641796 1061 ntBASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.15□□□□□ -1.42
CHMP3Q9Y3E7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CHMP3Q9Y3E7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 Y_RNA.625-201ENST00000411256 107 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC069218.2-201ENST00000411665 344 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 CHIAP3-201ENST00000423668 1133 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 SNRPEP4-201ENST00000435815 279 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 RAC1P7-201ENST00000445367 377 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 RPL23AP56-201ENST00000460778 453 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 MTATP8P1-201ENST00000467115 207 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 RPL23AP11-201ENST00000475260 469 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 RPL7P43-201ENST00000478876 753 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms