Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RNU6-730P-201ENST00000383954 104 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 RPL21P75-201ENST00000396599 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 RPL21P28-201ENST00000401418 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 MTND4LP20-201ENST00000402379 270 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AL592114.1-201ENST00000403842 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AL606495.1-201ENST00000422100 813 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AL590623.1-201ENST00000427864 105 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 MTCYBP34-201ENST00000439552 670 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 BX248409.1-201ENST00000455497 255 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 RPL21P39-201ENST00000463605 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC011979.1-201ENST00000472300 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 RPL21P93-201ENST00000480465 489 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC103975.1-201ENST00000482506 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC233702.1-201ENST00000482905 502 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC087190.1-201ENST00000484462 480 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC093663.2-201ENST00000484625 313 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC093591.1-201ENST00000491435 481 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 RPL21P16-201ENST00000495531 483 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 DSTNP2-201ENST00000504533 515 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC026801.2-201ENST00000515352 425 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC025881.1-201ENST00000518851 512 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 COX6CP8-201ENST00000522620 226 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 OSBPL9P3-201ENST00000534523 595 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 OR8K4P-201ENST00000534608 872 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 HSPE1P20-201ENST00000538133 289 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC079600.2-201ENST00000550076 130 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 MIR3670-2-201ENST00000582974 65 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 MIR3670-1-201ENST00000584160 65 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 MIR3670-3-201ENST00000584855 65 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC009570.1-201ENST00000609599 745 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 MIR3670-4-201ENST00000612260 65 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC091564.4-201ENST00000533934 2194 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC233263.6-201ENST00000631132 1963 ntBASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.41□□□□□ -2.02
HDGFL3Q9Y3E1 AC090740.1-201ENST00000623193 2262 ntBASIC2.4□□□□□ -2.02
HDGFL3Q9Y3E1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.4□□□□□ -2.02
HDGFL3Q9Y3E1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 RNA5SP27-201ENST00000363839 119 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 SNORA80A-201ENST00000363922 136 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 SNORA25.6-201ENST00000364121 118 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 RNU1-100P-201ENST00000365255 165 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-821P-201ENST00000390995 107 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AL592148.1-201ENST00000413568 445 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AL096701.2-201ENST00000416920 238 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 ARL2BPP3-201ENST00000421226 480 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC000041.1-201ENST00000439655 175 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AL645638.1-201ENST00000440519 361 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC004022.1-201ENST00000447766 1066 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC104073.1-201ENST00000451988 151 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC015908.1-201ENST00000478739 476 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 MTND5P4-201ENST00000514978 288 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 GTF3AP2-201ENST00000557014 266 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC025918.2-201ENST00000558683 763 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC090666.1-201ENST00000578241 445 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 MIR4635-201ENST00000583759 79 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC091057.2-201ENST00000602594 792 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC007619.2-201ENST00000605743 379 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC073968.1-201ENST00000618594 637 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC079228.1-201ENST00000624774 1049 ntBASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDGFL3Q9Y3E1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 AC025263.3-201ENST00000622965 1396 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-859P-201ENST00000362728 107 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-799P-201ENST00000363567 107 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RNVU1-3-201ENST00000364313 161 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.39□□□□□ -2.03
HDGFL3Q9Y3E1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms