Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 AC107021.2-201ENST00000567714 2095 ntBASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHANK2Q9UPX8 RNU6-457P-201ENST00000363999 107 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 MIR583-201ENST00000384846 75 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 AL445669.2-201ENST00000454425 421 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 OR4T1P-201ENST00000554933 911 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 AMZ2P1-203ENST00000565833 850 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 MIR5002-201ENST00000584713 97 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 RLIMP2-201ENST00000427891 1563 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 AC245100.2-201ENST00000454544 1679 ntBASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SHANK2Q9UPX8 AC009302.1-201ENST00000417147 390 ntBASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 BTF3P4-201ENST00000418852 495 ntBASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 SETP8-201ENST00000435341 628 ntBASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC008571.1-201ENST00000467232 300 ntBASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC010680.1-201ENST00000590024 3590 ntBASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.09□□□□□ -1.92
SHANK2Q9UPX8 AC006378.2-201ENST00000623178 2476 ntBASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 AL139276.1-201ENST00000311910 1001 ntBASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 RNA5SP270-201ENST00000411361 118 ntBASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 AL591719.1-201ENST00000444669 744 ntBASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 NAMPTP2-201ENST00000505629 1115 ntBASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 LRRC37A5P-203ENST00000580181 585 ntBASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHANK2Q9UPX8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 AP001148.1-201ENST00000624124 2359 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RNU6-582P-201ENST00000362989 107 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RN7SKP226-201ENST00000364912 300 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RPL21P1-201ENST00000399532 476 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 MTND4P13-201ENST00000402078 1023 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 AL592114.1-201ENST00000403842 483 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 NCSTNP1-201ENST00000406229 144 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 DPPA2P1-201ENST00000428060 556 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 RNA5SP490-201ENST00000517141 136 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 AP000889.2-201ENST00000532684 490 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 AC034268.2-201ENST00000571784 482 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 AC090897.3-201ENST00000636973 1157 ntBASIC3.07□□□□□ -1.92
SHANK2Q9UPX8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 AC000367.1-201ENST00000452711 1766 ntBASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 USP9YP6-201ENST00000413550 854 ntBASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 USP9YP34-201ENST00000453983 808 ntBASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 OR52A4P-203ENST00000498233 1014 ntBASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 AP003385.6-201ENST00000531603 374 ntBASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 AC011611.5-201ENST00000552477 578 ntBASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHANK2Q9UPX8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 U3.37-201ENST00000408528 213 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 SNRPFP2-201ENST00000440710 251 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 TRMT112P2-201ENST00000512910 132 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AC005951.1-201ENST00000576706 485 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AP000787.2-201ENST00000604432 568 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AC073387.2-201ENST00000604797 784 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AC131902.3-201ENST00000611767 581 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.05□□□□□ -1.92
SHANK2Q9UPX8 AL096701.2-201ENST00000416920 238 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 RPL34P26-201ENST00000445636 354 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 AC104986.1-201ENST00000517978 436 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 FAM92A1P1-201ENST00000528023 890 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 RN7SL622P-201ENST00000585292 275 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 RPL23AP61-201ENST00000623642 466 ntBASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHANK2Q9UPX8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms